yaaU:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000027875 (score: 1.000; bootstrap: 47%)
  • ENSAPMP00000013525 (score: 0.077)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000002101 (score: 1.000; bootstrap: 63%)
  • ENSBTAP00000036478 (score: 0.580)
  • ENSBTAP00000038597 (score: 0.347)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00032788 (score: 1.000; bootstrap: 56%)
  • WBGene00025931 (score: 0.351)
  • WBGene00026625 (score: 0.163)
  • WBGene00037007 (score: 0.114)
  • WBGene00025542 (score: 0.075)
  • WBGene00032345 (score: 0.069)
  • WBGene00028062 (score: 0.061)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00013439 (score: 1.000; bootstrap: 65%)
  • WBGene00003837 (score: 0.175)
  • WBGene00009350 (score: 0.173)
  • WBGene00008923 (score: 0.149)
  • WBGene00013083 (score: 0.124)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013754 (score: 1.000; bootstrap: 60%)
  • ENSCAFP00000017054 (score: 0.586)
  • ENSCAFP00000016624 (score: 0.543)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013845 (score: 1.000; bootstrap: 83%)
  • ENSCINP00000007882 (score: 0.280)
  • ENSCINP00000007897 (score: 0.223)
  • ENSCINP00000006844 (score: 0.095)
  • ENSCINP00000001835 (score: 0.073)
  • ENSCINP00000008011 (score: 0.073)
  • ENSCINP00000007862 (score: 0.067)
  • ENSCINP00000020512 (score: 0.061)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041114-109 (score: 1.000; bootstrap: 68%)
  • ZDB-CDNA-041114-109 (score: 1.000; bootstrap: 71%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0204172 (score: 1.000; bootstrap: 64%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0029896 (score: 1.000; bootstrap: 56%)
  • FBgn0051272 (score: 0.128)
  • FBgn0040350 (score: 0.115)
  • FBgn0037829 (score: 0.090)
  • FBgn0051106 (score: 0.083)
  • FBgn0030331 (score: 0.071)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18316-PA (score: 1.000; bootstrap: 59%)
  • GA20367-PA (score: 0.250)
  • GA20356-PA (score: 0.244)
  • GA19517-PA (score: 0.230)
  • GA12403-PA (score: 0.212)
  • GA19374-PA (score: 0.141)
  • GA17687-PA (score: 0.130)
  • GA21695-PA (score: 0.127)
  • GA21239-PA (score: 0.110)
  • GA18993-PA (score: 0.081)
  • GA19535-PA (score: 0.080)
  • GA20278-PA (score: 0.065)
  • GA19713-PA (score: 0.060)
  • GA20090-PA (score: 0.055)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000010921 (score: 1.000; bootstrap: 85%)
  • ENSGALP00000010915 (score: 0.768)
  • ENSGALP00000024233 (score: 0.176)
  • ENSGALP00000018877 (score: 0.147)
  • ENSGALP00000031185 (score: 0.124)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000245407 (score: 1.000; bootstrap: 57%)
  • ENSP00000200652 (score: 0.746)
  • ENSP00000265599 (score: 0.188)
  • ENSP00000308299 (score: 0.164)
  • ENSP00000341639 (score: 0.163)
  • ENSP00000275300 (score: 0.161)
  • ENSP00000310241 (score: 0.152)
  • ENSP00000350513 (score: 0.146)
  • ENSP00000301893 (score: 0.136)
  • ENSP00000353597 (score: 0.132)
  • ENSP00000295587 (score: 0.128)
  • ENSP00000349370 (score: 0.126)
  • ENSP00000301891 (score: 0.111)
  • ENSP00000311463 (score: 0.090)
  • ENSP00000348919 (score: 0.076)
  • ENSP00000273173 (score: 0.070)
  • ENSP00000279178 (score: 0.065)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000007539 (score: 1.000; bootstrap: 62%)
  • ENSMMUP00000020546 (score: 0.616)
  • ENSMMUP00000007540 (score: 0.325)
  • ENSMMUP00000009291 (score: 0.139)
  • ENSMMUP00000021329 (score: 0.133)
  • ENSMMUP00000008535 (score: 0.119)
  • ENSMMUP00000021324 (score: 0.115)
  • ENSMMUP00000010724 (score: 0.103)
  • ENSMMUP00000015568 (score: 0.100)
  • ENSMMUP00000012184 (score: 0.092)
  • ENSMMUP00000006443 (score: 0.058)
  • ENSMMUP00000030216 (score: 0.054)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000017473 (score: 1.000; bootstrap: 61%)
  • ENSMODP00000017476 (score: 0.748)
  • ENSMODP00000022356 (score: 0.168)
  • ENSMODP00000008425 (score: 0.155)
  • ENSMODP00000023676 (score: 0.151)
  • ENSMODP00000008579 (score: 0.150)
  • ENSMODP00000015342 (score: 0.142)
  • ENSMODP00000008386 (score: 0.141)
  • ENSMODP00000010338 (score: 0.140)
  • ENSMODP00000026430 (score: 0.130)
  • ENSMODP00000006069 (score: 0.117)
  • ENSMODP00000012374 (score: 0.116)
  • ENSMODP00000010177 (score: 0.114)
  • ENSMODP00000010388 (score: 0.107)
  • ENSMODP00000021458 (score: 0.105)
  • ENSMODP00000019546 (score: 0.095)
  • ENSMODP00000012459 (score: 0.094)
  • ENSMODP00000026429 (score: 0.094)
  • ENSMODP00000010408 (score: 0.090)
  • ENSMODP00000015320 (score: 0.070)
  • ENSMODP00000012534 (score: 0.066)

From Inparanoid:20070104

Mus musculus

  • MGI:1922459 (score: 1.000; bootstrap: 55%)
  • MGI:1927139 (score: 0.606)
  • MGI:1927338 (score: 0.535)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000032033 (score: 1.000; bootstrap: 77%)
  • ENSPTRP00000032034 (score: 0.448)
  • ENSPTRP00000032032 (score: 0.300)
  • ENSPTRP00000006520 (score: 0.164)
  • ENSPTRP00000029458 (score: 0.151)
  • ENSPTRP00000025451 (score: 0.149)
  • ENSPTRP00000039128 (score: 0.149)
  • ENSPTRP00000029457 (score: 0.145)
  • ENSPTRP00000031591 (score: 0.124)
  • ENSPTRP00000039828 (score: 0.114)
  • ENSPTRP00000001968 (score: 0.110)
  • ENSPTRP00000006613 (score: 0.093)
  • ENSPTRP00000025452 (score: 0.083)
  • ENSPTRP00000046965 (score: 0.079)
  • ENSPTRP00000006536 (score: 0.076)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000024459 (score: 1.000; bootstrap: 56%)
  • ENSRNOP00000048726 (score: 0.579)
  • ENSRNOP00000015084 (score: 0.514)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC2H82 (score: 1.000; bootstrap: 81%)
  • SPBC16831 (score: 0.498)
  • SPAC23D32 (score: 0.496)
  • SPBC8E41c (score: 0.486)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000161669 (score: 1.000; bootstrap: 71%)
  • NEWSINFRUP00000166221 (score: 0.235)
  • NEWSINFRUP00000127636 (score: 0.216)
  • NEWSINFRUP00000151256 (score: 0.208)
  • NEWSINFRUP00000138746 (score: 0.201)
  • NEWSINFRUP00000153444 (score: 0.150)
  • NEWSINFRUP00000145773 (score: 0.059)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00025235001 (score: 1.000; bootstrap: 79%)
  • GSTENP00017382001 (score: 1.000; bootstrap: 54%)
  • GSTENP00019515001 (score: 1.000; bootstrap: 65%)
  • GSTENP00028687001 (score: 0.756)
  • GSTENP00022418001 (score: 0.440)
  • GSTENP00016068001 (score: 0.163)
  • GSTENP00002571001 (score: 0.117)

From Inparanoid:20070104

Shigella flexneri

YAAU

From SHIGELLACYC

E. coli O157

YAAU

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:103473

Pfam (EcoliWiki Page)

PF00083 Sugar (and other) transporter

EcoCyc

EcoCyc:EG11566

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11566

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001519

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1527

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000156

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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