udk:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000028090 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000032846 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G27190 (score: 1.000; bootstrap: 99%)
  • AT5G40870 (score: 0.882)
  • AT1G55810 (score: 0.674)
  • AT4G26510 (score: 0.624)
  • AT3G27440 (score: 0.614)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000020981 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000015623 (score: 0.078)
  • ENSBTAP00000014316 (score: 0.059)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00026196 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00008948 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000019858 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000029480 (score: 0.500)
  • ENSCAFP00000019316 (score: 0.215)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007458 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000014825 (score: 0.061)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-7158 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1585 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1004 (score: 0.743)
  • ZDB-GENE-030131-5265 (score: 0.743)
  • ZDB-CDNA-040912-115 (score: 0.556)
  • ZDB-GENE-040912-113 (score: 0.556)
  • ZDB-GENE-040724-238 (score: 0.171)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230208 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0022029 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19542-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000009713 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000005542 (score: 0.060)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000271395 (score: 1.000; bootstrap: 100%)
  • ENSP00000253015 (score: 0.560)
  • ENSP00000346155 (score: 0.202)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000000760 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000013056 (score: 0.493)
  • ENSMMUP00000020403 (score: 0.202)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000021258 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000001634 (score: 0.065)

From Inparanoid:20070104

Mus musculus

  • MGI:1931744 (score: 1.000; bootstrap: 100%)
  • MGI:98904 (score: 0.568)
  • MGI:1915806 (score: 0.205)

From Inparanoid:20070104

Oryza gramene

  • Q53LT4 (score: 1.000; bootstrap: 99%)
  • Q6K7V0 (score: 1.000; bootstrap: 99%)
  • Q6ZIA3 (score: 0.619)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000002709 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000036774 (score: 0.560)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000015792 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000005213 (score: 0.446)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNR012W (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC1621c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000135528 (score: 1.000; bootstrap: 99%)
  • NEWSINFRUP00000128558 (score: 0.556)
  • NEWSINFRUP00000128310 (score: 0.183)
  • NEWSINFRUP00000168407 (score: 0.123)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00013361001 (score: 1.000; bootstrap: 99%)
  • GSTENP00014402001 (score: 0.546)
  • GSTENP00023499001 (score: 0.120)
  • GSTENP00009786001 (score: 0.090)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000037794 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000003108 (score: 0.470)

From Inparanoid:20070104

Shigella flexneri

UDK

From SHIGELLACYC

E. coli O157

UDK

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Panther (EcoliWiki Page)

PTHR10285:SF6

Pfam (EcoliWiki Page)

PF00485 Phosphoribulokinase / Uridine kinase family

EcoCyc

EcoCyc:EG11701

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11701

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001644

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1652

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006840

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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