trxC:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000012348 (score: 1.000; bootstrap: 60%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000000014 (score: 1.000; bootstrap: 63%)
  • ENSBTAP00000033144 (score: 0.494)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00031142 (score: 1.000; bootstrap: 55%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00007099 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000002247 (score: 1.000; bootstrap: 59%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013204 (score: 1.000; bootstrap: 83%)
  • ENSCINP00000005773 (score: 0.228)
  • ENSCINP00000006356 (score: 0.132)
  • ENSCINP00000008588 (score: 0.079)
  • ENSCINP00000014401 (score: 0.072)
  • ENSCINP00000007213 (score: 0.050)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1795 (score: 1.000; bootstrap: 62%)
  • ZDB-CDNA-040425-2735 (score: 1.000; bootstrap: 62%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0185040 (score: 1.000; bootstrap: 49%)
  • DDB0186269 (score: 1.000; bootstrap: 50%)
  • DDB0191909 (score: 1.000; bootstrap: 51%)
  • DDB0217531 (score: 0.064)
  • DDB0231409 (score: 0.051)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0034472 (score: 1.000; bootstrap: 59%)
  • FBgn0035334 (score: 0.281)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17324-PA (score: 1.000; bootstrap: 65%)
  • GA16546-PA (score: 0.174)
  • GA12311-PA (score: 0.140)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000020444 (score: 1.000; bootstrap: 56%)
  • ENSGALP00000020443 (score: 0.118)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000216185 (score: 1.000; bootstrap: 57%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000002728 (score: 1.000; bootstrap: 61%)
  • ENSMMUP00000012107 (score: 0.150)
  • ENSMMUP00000000812 (score: 0.123)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000000995 (score: 1.000; bootstrap: 64%)

From Inparanoid:20070104

Mus musculus

  • MGI:1929468 (score: 1.000; bootstrap: 65%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000020036 (score: 1.000; bootstrap: 56%)
  • ENSPTRP00000039310 (score: 0.068)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000007537 (score: 1.000; bootstrap: 64%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YLR043C (score: 1.000; bootstrap: 80%)
  • YGR209C (score: 0.674)
  • YCR083W (score: 0.217)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC5778c (score: 1.000; bootstrap: 65%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000167897 (score: 1.000; bootstrap: 50%)
  • NEWSINFRUP00000137354 (score: 0.339)
  • NEWSINFRUP00000127860 (score: 0.268)
  • NEWSINFRUP00000132913 (score: 0.159)
  • NEWSINFRUP00000138309 (score: 0.142)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00015494001 (score: 1.000; bootstrap: 52%)
  • GSTENP00019677001 (score: 0.221)
  • GSTENP00026385001 (score: 0.154)
  • GSTENP00008020001 (score: 0.153)
  • GSTENP00009837001 (score: 0.114)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000000504 (score: 1.000; bootstrap: 70%)

From Inparanoid:20070104

Shigella flexneri

TRXC

From SHIGELLACYC

E. coli O157

TRXC

From ECOO157CYC


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:52833

Panther (EcoliWiki Page)

PTHR10438:SF95

Pfam (EcoliWiki Page)

PF00085 Thioredoxin

EcoCyc

EcoCyc:EG11887

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11887

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001817

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1833

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008501

Escherichia coli str. K-12 substr. MG1655

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]