tktB:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000026099 (score: 1.000; bootstrap: 100%)
  • YP_026188 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000027886 (score: 1.000; bootstrap: 100%)
  • YP_026188 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Arabidopsis thaliana

  • YP_026188 (score: 0.561)
  • AT2G45290 (score: 1.000; bootstrap: 100%)
  • AT3G60750 (score: 0.819)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000011778 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000004892 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000036246 (score: 0.644)
  • YP_026188 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • YP_026188 (score: 1.000; bootstrap: 95%)
  • WBGene00026255 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • YP_026188 (score: 1.000; bootstrap: 95%)
  • WBGene00008506 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000012705 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000028768 (score: 0.577)
  • YP_026188 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000015532 (score: 1.000; bootstrap: 100%)
  • YP_026188 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Danio rerio

  • YP_026188 (score: 0.741)
  • ZDB-CDNA-040425-919 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-920 (score: 0.983)
  • ZDB-GENE-030909-13 (score: 0.983)

From Inparanoid:20070104

Dictyostelium discoideum

  • YP_026188 (score: 0.639)
  • DDB0231244 (score: 1.000; bootstrap: 100%)
  • DDB0217422 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • YP_026188 (score: 1.000; bootstrap: 93%)
  • FBgn0037607 (score: 1.000; bootstrap: 100%)
  • FBgn0036784 (score: 0.724)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000008498 (score: 1.000; bootstrap: 100%)
  • YP_026188 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000280605 (score: 1.000; bootstrap: 100%)
  • ENSP00000296289 (score: 1.000; bootstrap: 100%)
  • ENSP00000217905 (score: 0.604)
  • YP_026188 (score: 1.000; bootstrap: 85%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000004516 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000018961 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000017972 (score: 0.669)
  • YP_026188 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000014624 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000015737 (score: 0.659)
  • YP_026188 (score: 0.739)

From Inparanoid:20070104

Mus musculus

  • MGI:1921669 (score: 1.000; bootstrap: 100%)
  • MGI:1933244 (score: 0.599)
  • YP_026188 (score: 0.740)

From Inparanoid:20070104

Oryza gramene

  • YP_026188 (score: 0.576)
  • Q7SIC9 (score: 1.000; bootstrap: 100%)
  • Q84ZY2 (score: 0.874)
  • Q5VNW1 (score: 0.774)
  • Q7XWP9 (score: 0.663)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000028429 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000038656 (score: 0.303)
  • YP_026188 (score: 0.740)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000018987 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000021862 (score: 1.000; bootstrap: 100%)
  • YP_026188 (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YP_026188 (score: 0.602)
  • YPR074C (score: 1.000; bootstrap: 100%)
  • YBR117C (score: 0.556)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • YP_026188 (score: 1.000; bootstrap: 100%)
  • SPBC2G55 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000145381 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000151873 (score: 0.517)
  • NEWSINFRUP00000157989 (score: 0.338)
  • NEWSINFRUP00000145384 (score: 0.060)
  • YP_026188 (score: 0.742)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00022581001 (score: 1.000; bootstrap: 100%)
  • GSTENP00027384001 (score: 0.572)
  • YP_026188 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000001831 (score: 1.000; bootstrap: 100%)
  • YP_026188 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

TKTB

From SHIGELLACYC

E. coli O157

TKTB

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02779 Transketolase, pyrimidine binding domain

Pfam (EcoliWiki Page)

PF02780 Transketolase, C-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:52518

Superfamily (EcoliWiki Page)

SUPERFAMILY:52518

Superfamily (EcoliWiki Page)

SUPERFAMILY:52922

Panther (EcoliWiki Page)

PTHR11624:SF38

Pfam (EcoliWiki Page)

PF00456 Transketolase, thiamine diphosphate binding domain

EcoCyc

EcoCyc:EG12100

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12100

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002005

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2024

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008117

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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