ratA:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000018430 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G17650 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000005722 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000006115 (score: 0.521)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00036435 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00044648 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000000166 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000015947 (score: 0.626)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1760 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2700 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040625-34 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-264 (score: 0.395)
  • ZDB-GENE-050417-263 (score: 0.395)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0168072 (score: 1.000; bootstrap: 100%)
  • DDB0217315 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21766-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000013042 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000257927 (score: 1.000; bootstrap: 100%)
  • ENSP00000263960 (score: 0.519)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000013744 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000015375 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1915126 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5N8Y6 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000021824 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000008658 (score: 0.183)
  • ENSPTRP00000008661 (score: 0.077)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000044290 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000050509 (score: 0.507)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC16A117 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000128886 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000182154 (score: 0.339)
  • NEWSINFRUP00000143903 (score: 0.291)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00022036001 (score: 1.000; bootstrap: 100%)
  • GSTENP00023546001 (score: 0.271)
  • GSTENP00021742001 (score: 0.219)
  • GSTENP00019877001 (score: 0.093)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000026291 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000020982 (score: 0.511)

From Inparanoid:20070104

Shigella flexneri

S2856

From SHIGELLACYC

E. coli O157

Z3912

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR12901:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:55961

Pfam (EcoliWiki Page)

PF03364 Polyketide cyclase / dehydrase and lipid transport

EcoCyc

EcoCyc:G7358

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13193

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003926

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2985

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008618

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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