phr:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000013343 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000013228 (score: 0.369)
  • ENSANGP00000019076 (score: 0.176)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G08920 (score: 1.000; bootstrap: 84%)
  • AT1G04400 (score: 0.370)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000028277 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000037877 (score: 0.527)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013814 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000002620 (score: 0.706)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040617-2 (score: 1.000; bootstrap: 59%)
  • ZDB-CDNA-050706-5 (score: 1.000; bootstrap: 59%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0016054 (score: 1.000; bootstrap: 100%)
  • FBgn0025680 (score: 0.180)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15376-PA (score: 1.000; bootstrap: 100%)
  • GA17677-PA (score: 0.190)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000000142 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000020598 (score: 0.420)
  • ENSGALP00000013730 (score: 0.347)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000263762 (score: 1.000; bootstrap: 100%)
  • ENSP00000008527 (score: 0.686)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000003303 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000028723 (score: 0.688)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000024807 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000001926 (score: 0.611)

From Inparanoid:20070104

Mus musculus

  • MGI:1270859 (score: 1.000; bootstrap: 100%)
  • MGI:1270841 (score: 0.687)

From Inparanoid:20070104

Oryza gramene

  • Q5MD22 (score: 1.000; bootstrap: 88%)
  • Q8H6B3 (score: 0.989)
  • Q948J4 (score: 0.850)
  • Q7XV36 (score: 0.849)
  • Q948J6 (score: 0.755)
  • Q6YXC2 (score: 0.755)
  • Q7XXN9 (score: 0.658)
  • Q9SXI0 (score: 0.426)
  • Q712D5 (score: 0.334)
  • Q852P4 (score: 0.333)
  • Q70YK6 (score: 0.331)
  • Q712D6 (score: 0.150)
  • Q6K1S1 (score: 0.079)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000006139 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000009157 (score: 0.604)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000010142 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000033441 (score: 0.681)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOR386W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000129951 (score: 1.000; bootstrap: 65%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00021451001 (score: 1.000; bootstrap: 94%)
  • GSTENP00023788001 (score: 0.127)
  • GSTENP00021379001 (score: 0.103)
  • GSTENP00008509001 (score: 0.096)
  • GSTENP00008508001 (score: 0.085)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000008500 (score: 1.000; bootstrap: 56%)
  • ENSXETP00000036934 (score: 0.507)
  • ENSXETP00000033570 (score: 0.395)
  • ENSXETP00000002230 (score: 0.374)

From Inparanoid:20070104

Shigella flexneri

PHRB

From SHIGELLACYC

E. coli O157

PHRB

From ECOO157CYC


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03441 FAD binding domain of DNA photolyase

Pfam (EcoliWiki Page)

PF00875 DNA photolyase

Superfamily (EcoliWiki Page)

SUPERFAMILY:48173

Superfamily (EcoliWiki Page)

SUPERFAMILY:52425

Panther (EcoliWiki Page)

PTHR11455:SF0

EcoCyc

EcoCyc:EG10736

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10736

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000727

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0729

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002417

Escherichia coli str. K-12 substr. MG1655

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]