hisS:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000017615 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000009936 (score: 0.667)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000023883 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G46100 (score: 1.000; bootstrap: 100%)
  • AT5G03406 (score: 0.402)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000035214 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000025094 (score: 0.713)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00037191 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00002001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000008834 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000008840 (score: 0.688)
  • ENSCAFP00000012980 (score: 0.060)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000017672 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040912-152 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040912-154 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231331 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0027087 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19519-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000001150 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000015647 (score: 0.075)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000352741 (score: 1.000; bootstrap: 100%)
  • ENSP00000304668 (score: 1.000; bootstrap: 100%)
  • ENSP00000263791 (score: 0.060)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000005972 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000005974 (score: 0.502)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000014149 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000014176 (score: 0.705)

From Inparanoid:20070104

Mus musculus

  • MGI:108087 (score: 1.000; bootstrap: 100%)
  • MGI:1918041 (score: 0.667)
  • MGI:1353427 (score: 0.065)

From Inparanoid:20070104

Oryza gramene

  • Q6Z695 (score: 1.000; bootstrap: 100%)
  • Q9ZTW6 (score: 0.068)
  • Q5WN00 (score: 0.062)
  • P93422 (score: 0.062)
  • Q9SBK5 (score: 0.060)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000046329 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000029618 (score: 0.706)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000021797 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000022642 (score: 0.573)
  • ENSRNOP00000034118 (score: 0.553)
  • ENSRNOP00000009222 (score: 0.056)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YPR033C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC2G22 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000159662 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000130136 (score: 0.056)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000036324 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

HISS

From SHIGELLACYC

E. coli O157

HISS

From ECOO157CYC


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03129 Anticodon binding domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:52954

Panther (EcoliWiki Page)

PTHR11476:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:55681

Pfam (EcoliWiki Page)

PF00587 tRNA synthetase class II core domain (G, H, P, S and T)

EcoCyc

EcoCyc:EG10453

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10453

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000446

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0448

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008278

Escherichia coli str. K-12 substr. MG1655

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]