dkgA:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000023501 (score: 1.000; bootstrap: 90%)
  • ENSANGP00000019781 (score: 1.000; bootstrap: 89%)
  • ENSANGP00000003966 (score: 0.709)
  • ENSANGP00000023298 (score: 0.707)
  • ENSANGP00000023237 (score: 0.531)
  • ENSANGP00000019779 (score: 0.245)
  • ENSANGP00000018090 (score: 0.245)
  • ENSANGP00000018087 (score: 0.212)
  • ENSANGP00000019775 (score: 0.188)
  • ENSANGP00000018089 (score: 0.181)
  • ENSANGP00000015026 (score: 0.132)
  • ENSANGP00000002572 (score: 0.096)
  • ENSANGP00000019780 (score: 0.096)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000018454 (score: 1.000; bootstrap: 99%)
  • ENSAPMP00000008853 (score: 0.375)
  • ENSAPMP00000031837 (score: 0.076)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G21250 (score: 1.000; bootstrap: 99%)
  • AT2G21260 (score: 0.915)
  • AT2G37770 (score: 0.107)
  • AT2G37790 (score: 0.089)
  • AT2G37760 (score: 0.089)
  • AT3G53880 (score: 0.081)
  • AT5G62420 (score: 0.070)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000013082 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000002073 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000022850 (score: 0.421)
  • ENSBTAP00000000630 (score: 0.221)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00039667 (score: 1.000; bootstrap: 86%)
  • WBGene00039666 (score: 0.277)
  • WBGene00042655 (score: 0.150)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00012722 (score: 1.000; bootstrap: 84%)
  • WBGene00012723 (score: 0.297)
  • WBGene00020369 (score: 0.167)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000006806 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000003561 (score: 0.296)
  • ENSCAFP00000001848 (score: 0.289)
  • ENSCAFP00000007959 (score: 0.209)
  • ENSCAFP00000005035 (score: 0.184)
  • ENSCAFP00000019962 (score: 0.180)
  • ENSCAFP00000007901 (score: 0.154)
  • ENSCAFP00000004963 (score: 0.097)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000001375 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000016253 (score: 0.188)
  • ENSCINP00000015665 (score: 0.118)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050417-302 (score: 1.000; bootstrap: 72%)
  • ZDB-CDNA-050417-303 (score: 1.000; bootstrap: 71%)
  • ZDB-CDNA-041010-156 (score: 0.054)
  • ZDB-GENE-041010-156 (score: 0.054)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231286 (score: 1.000; bootstrap: 99%)
  • DDB0215363 (score: 1.000; bootstrap: 99%)
  • DDB0231282 (score: 0.348)
  • DDB0231290 (score: 0.324)
  • DDB0231284 (score: 0.272)
  • DDB0231291 (score: 0.268)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0036182 (score: 1.000; bootstrap: 100%)
  • FBgn0036183 (score: 0.272)
  • FBgn0036290 (score: 0.245)
  • FBgn0027552 (score: 0.232)
  • FBgn0035476 (score: 0.223)
  • FBgn0033101 (score: 0.175)
  • FBgn0037537 (score: 0.115)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19342-PA (score: 1.000; bootstrap: 100%)
  • GA19341-PA (score: 0.331)
  • GA10458-PA (score: 0.266)
  • GA10606-PA (score: 0.228)
  • GA21786-PA (score: 0.202)
  • GA10472-PA (score: 0.192)
  • GA15457-PA (score: 0.120)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000021301 (score: 1.000; bootstrap: 99%)
  • ENSGALP00000021305 (score: 0.810)
  • ENSGALP00000005480 (score: 0.794)
  • ENSGALP00000021303 (score: 0.730)
  • ENSGALP00000021315 (score: 0.628)
  • ENSGALP00000021280 (score: 0.388)
  • ENSGALP00000029923 (score: 0.346)
  • ENSGALP00000016630 (score: 0.308)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000262749 (score: 1.000; bootstrap: 99%)
  • ENSP00000285930 (score: 0.311)
  • ENSP00000352584 (score: 0.287)
  • ENSP00000328745 (score: 0.263)
  • ENSP00000324589 (score: 0.203)
  • ENSP00000307205 (score: 0.201)
  • ENSP00000242375 (score: 0.201)
  • ENSP00000263126 (score: 0.193)
  • ENSP00000318831 (score: 0.175)
  • ENSP00000303899 (score: 0.171)
  • ENSP00000298375 (score: 0.159)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000003327 (score: 1.000; bootstrap: 92%)
  • ENSMMUP00000001232 (score: 0.381)
  • ENSMMUP00000016175 (score: 0.243)
  • ENSMMUP00000030645 (score: 0.237)
  • ENSMMUP00000030642 (score: 0.237)
  • ENSMMUP00000030551 (score: 0.217)
  • ENSMMUP00000015717 (score: 0.183)
  • ENSMMUP00000020365 (score: 0.162)
  • ENSMMUP00000009124 (score: 0.083)
  • ENSMMUP00000001037 (score: 0.051)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000002869 (score: 1.000; bootstrap: 97%)
  • ENSMODP00000017690 (score: 0.314)
  • ENSMODP00000017328 (score: 0.201)
  • ENSMODP00000023056 (score: 0.195)

From Inparanoid:20070104

Mus musculus

  • MGI:1914758 (score: 1.000; bootstrap: 100%)
  • MGI:1353494 (score: 0.455)
  • MGI:101918 (score: 0.444)
  • MGI:107673 (score: 0.428)
  • MGI:1915111 (score: 0.425)
  • MGI:2384785 (score: 0.292)
  • MGI:1933427 (score: 0.267)
  • MGI:1351661 (score: 0.239)
  • MGI:2653678 (score: 0.230)
  • MGI:1351662 (score: 0.228)
  • MGI:1929955 (score: 0.221)
  • MGI:2145420 (score: 0.211)
  • MGI:2145458 (score: 0.207)
  • MGI:1918111 (score: 0.202)
  • MGI:1924587 (score: 0.193)
  • MGI:2151104 (score: 0.076)

From Inparanoid:20070104

Oryza gramene

  • Q6Z718 (score: 1.000; bootstrap: 94%)
  • Q7XYE0 (score: 0.482)
  • Q60EL7 (score: 0.124)
  • Q941T6 (score: 0.120)
  • Q941T8 (score: 0.105)
  • P23901 (score: 0.095)
  • Q42837 (score: 0.095)
  • Q39284 (score: 0.091)
  • Q65WW3 (score: 0.078)
  • Q43320 (score: 0.074)
  • Q94LN1 (score: 0.059)
  • Q7G767 (score: 0.059)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000001169 (score: 1.000; bootstrap: 99%)
  • ENSPTRP00000033770 (score: 0.321)
  • ENSPTRP00000033774 (score: 0.285)
  • ENSPTRP00000033780 (score: 0.237)
  • ENSPTRP00000033814 (score: 0.201)
  • ENSPTRP00000003803 (score: 0.189)
  • ENSPTRP00000003797 (score: 0.187)
  • ENSPTRP00000003805 (score: 0.173)
  • ENSPTRP00000003793 (score: 0.157)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000023133 (score: 1.000; bootstrap: 99%)
  • ENSRNOP00000012879 (score: 0.482)
  • ENSRNOP00000018151 (score: 0.454)
  • ENSRNOP00000013133 (score: 0.416)
  • ENSRNOP00000013423 (score: 0.416)
  • ENSRNOP00000013073 (score: 0.416)
  • ENSRNOP00000049662 (score: 0.308)
  • ENSRNOP00000035187 (score: 0.247)
  • ENSRNOP00000023072 (score: 0.226)
  • ENSRNOP00000043520 (score: 0.203)
  • ENSRNOP00000040355 (score: 0.132)
  • ENSRNOP00000042170 (score: 0.084)
  • ENSRNOP00000034955 (score: 0.080)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR368W (score: 1.000; bootstrap: 89%)
  • YOR120W (score: 0.545)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC2F35c (score: 1.000; bootstrap: 100%)
  • SPAP32A82 (score: 0.203)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000148409 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000149593 (score: 0.458)
  • NEWSINFRUP00000167891 (score: 0.260)
  • NEWSINFRUP00000162085 (score: 0.212)
  • NEWSINFRUP00000178772 (score: 0.188)
  • NEWSINFRUP00000166150 (score: 0.142)
  • NEWSINFRUP00000139151 (score: 0.066)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00016802001 (score: 1.000; bootstrap: 96%)
  • GSTENP00034277001 (score: 0.167)
  • GSTENP00028647001 (score: 0.128)
  • GSTENP00004273001 (score: 0.100)
  • GSTENP00026667001 (score: 0.084)
  • GSTENP00034278001 (score: 0.057)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000029033 (score: 1.000; bootstrap: 70%)

From Inparanoid:20070104

Shigella flexneri

YQHE

From SHIGELLACYC

E. coli O157

YQHE

From ECOO157CYC

edit table


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00248 Aldo/keto reductase family

Superfamily (EcoliWiki Page)

SUPERFAMILY:51430

Panther (EcoliWiki Page)

PTHR11732:SF86

EcoCyc

EcoCyc:G7565

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13015

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004124

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2835

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009892

Escherichia coli str. K-12 substr. MG1655

edit table

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=dkgA:Evolution&oldid=1391150"