chaC:Evolution

From EcoliWiki
Jump to: navigation, search

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000022096 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000025705 (score: 0.157)
  • ENSANGP00000013474 (score: 0.128)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000012793 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G44790 (score: 1.000; bootstrap: 100%)
  • AT4G31290 (score: 0.361)
  • AT5G26220 (score: 0.326)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000013689 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000025922 (score: 0.259)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00037387 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017724 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013862 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000003988 (score: 0.260)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000016957 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050706-146 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050706-55 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0187117 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0039109 (score: 1.000; bootstrap: 100%)
  • FBgn0030411 (score: 0.075)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA10276-PA (score: 1.000; bootstrap: 100%)
  • GA15390-PA (score: 0.073)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000013867 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000013307 (score: 0.201)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000249798 (score: 1.000; bootstrap: 100%)
  • ENSP00000295304 (score: 0.251)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000019093 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000013940 (score: 0.259)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000000223 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000001947 (score: 0.257)

From Inparanoid:20070104

Mus musculus

  • MGI:1916315 (score: 1.000; bootstrap: 100%)
  • MGI:1915294 (score: 0.243)

From Inparanoid:20070104

Oryza gramene

  • Q6K7C2 (score: 1.000; bootstrap: 100%)
  • Q7XZR5 (score: 0.538)
  • Q7XV22 (score: 0.297)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000011839 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000020465 (score: 0.238)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000019392 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000002094 (score: 0.245)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC31F103 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000175706 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000175380 (score: 0.521)
  • NEWSINFRUP00000145837 (score: 0.232)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00020706001 (score: 1.000; bootstrap: 100%)
  • GSTENP00000823001 (score: 0.497)
  • GSTENP00032360001 (score: 0.478)
  • GSTENP00004877001 (score: 0.261)
  • GSTENP00004875001 (score: 0.217)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000050657 (score: 1.000; bootstrap: 72%)

From Inparanoid:20070104

Shigella flexneri

CHAC

From SHIGELLACYC

E. coli O157

CHAC

From ECOO157CYC


Do-It-Yourself Web Tools

<protect></protect>

Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF04752 ChaC-like protein

Panther (EcoliWiki Page)

PTHR12192:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:110857

EcoCyc

EcoCyc:EG12403

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12403

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002265

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2303

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004089

Escherichia coli str. K-12 substr. MG1655

<protect></protect>

Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]