caiC:Quickview

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

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Standard Name

caiC

Gene Synonym(s)

ECK0038, b0037, JW0036, yaaM[1], yaaM

Product Desc.

CAIC[2][3]

Crotonobetain/carnitine-CoA ligase[4]

Product Synonyms(s)

predicted crotonobetaine CoA ligase:carnitine CoA ligase[1], B0037[2][1], YaaM[2][1], CaiC[2][1] , ECK0038, JW0036, yaaM, b0037

Function from GO

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Knock-Out Phenotype
Regulation/Expression

transcription unit(s): caiTABCDE[2]

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

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Notes

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Simliarity comparisons with Salmonella, Desulfotomaculum, Shewanella and Proteus CaiC homologs indicate that the second ATG is the likely start site, which also has a good predicted RBS of GGAG (Personal communication, G. Plunkett, 6/07).[4]



References

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  1. 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.