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Prediction of transmembrane helices in proteins
TMHMM is a widely used bioinformatics tool, based on the hidden Markov model (HMM), which is used to predict transmembrane helices of integral membrane proteins. 
Hardware/Software requirements, if applicable
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- Krogh, A et al. (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305 567-80 PubMed