PMID:9391051

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Citation

Severinov, K and Darst, SA (1997) A mutant RNA polymerase that forms unusual open promoter complexes. Proc. Natl. Acad. Sci. U.S.A. 94:13481-6

Abstract

We describe a mutant Escherichia coli RNA polymerase (RNAP) that forms stable open promoter complexes even at -20 degrees C but with a shortened melted region that extends downstream to only position -7. In the presence of initiating transcription substrates, the mutant RNAP undergoes a temperature-dependent isomerization, resulting in a promoter complex that is indistinguishable from the wild-type RNAP-promoter complex, with the melted region extended downstream to position +4. We propose that the open complex formed by the mutant RNAP represents an intermediate on the normal promoter-opening pathway and that our results support earlier findings that initial promoter opening occurs in the upstream region of the -10 promoter consensus element and subsequently extends downstream to encompass the transcription start site.

Links

PubMed PMC28331

Keywords

Base Sequence; Binding Sites/genetics; DNA, Bacterial/genetics; DNA, Bacterial/metabolism; DNA-Directed RNA Polymerases/chemistry; DNA-Directed RNA Polymerases/genetics; DNA-Directed RNA Polymerases/metabolism; Escherichia coli/enzymology; Escherichia coli/genetics; Macromolecular Substances; Molecular Sequence Data; Mutation; Promoter Regions, Genetic; Protein Conformation; Sequence Deletion; Temperature; Thermodynamics; Transcription, Genetic

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