PMID:9008164

From EcoliWiki
Jump to navigation Jump to search
Citation

Bycroft, M, Hubbard, TJ, Proctor, M, Freund, SM and Murzin, AG (1997) The solution structure of the S1 RNA binding domain: a member of an ancient nucleic acid-binding fold. Cell 88:235-42

Abstract

The S1 domain, originally identified in ribosomal protein S1, is found in a large number of RNA-associated proteins. The structure of the S1 RNA-binding domain from the E. coli polynucleotide phosphorylase has been determined using NMR methods and consists of a five-stranded antiparallel beta barrel. Conserved residues on one face of the barrel and adjacent loops form the putative RNA-binding site. The structure of the S1 domain is very similar to that of cold shock protein, suggesting that they are both derived from an ancient nucleic acid-binding protein. Enhanced sequence searches reveal hitherto unidentified S1 domains in RNase E, RNase II, NusA, EMB-5, and other proteins.

Links

PubMed

Keywords

Amino Acid Sequence; Bacterial Proteins/chemistry; Binding Sites; Cold Temperature; Crystallography, X-Ray; Escherichia coli/enzymology; Eukaryotic Initiation Factor-2/metabolism; Fungal Proteins/chemistry; Magnetic Resonance Spectroscopy; Models, Molecular; Molecular Sequence Data; Phosphorylation; Polyribonucleotide Nucleotidyltransferase/chemistry; Polyribonucleotide Nucleotidyltransferase/metabolism; Protein Conformation; Protein Folding; Protein Structure, Secondary; Protein Structure, Tertiary; Protein-Serine-Threonine Kinases/metabolism; RNA/metabolism; RNA-Binding Proteins/chemistry; RNA-Binding Proteins/metabolism; Ribosomal Proteins/chemistry; eIF-2 Kinase

Significance

You can help EcoliWiki by summarizing why this paper is useful

Useful Materials and Methods

You can help Ecoliwiki by describing the useful materials (strains, plasmids, antibodies, etc) described in this paper.

Annotations

<annotationlinks/>

EcoliWiki Links

Add links to pages that link here (e.g. gene, product, method pages)

References

See Help:References for how to manage references in EcoliWiki.