PMID:18215303

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Citation

Rosengarten, RD, Sperling, EA, Moreno, MA, Leys, SP and Dellaporta, SL (2008) The mitochondrial genome of the hexactinellid sponge Aphrocallistes vastus: evidence for programmed translational frameshifting. BMC Genomics 9:33

Abstract

Mitochondrial genomes (mtDNA) of numerous sponges have been sequenced as part of an ongoing effort to resolve the class-level phylogeny of the Porifera, as well as to place the various lower metazoan groups on the animal-kingdom tree. Most recently, the partial mtDNA of two glass sponges, class Hexactinellida, were reported. While previous phylogenetic estimations based on these data remain uncertain due to insufficient taxon sampling and accelerated rates of evolution, the mtDNA molecules themselves reveal interesting traits that may be unique to hexactinellids. Here we determined the first complete mitochondrial genome of a hexactinellid sponge, Aphrocallistes vastus, and compared it to published poriferan mtDNAs to further describe characteristics specific to hexactinellid and other sponge mitochondrial genomes.

Links

PubMed PMC2267718 Online version:10.1186/1471-2164-9-33

Keywords

Amino Acid Sequence; Animals; Base Composition; Base Sequence; Codon/genetics; Conserved Sequence; DNA, Intergenic; DNA, Mitochondrial/chemistry; DNA, Mitochondrial/genetics; Frameshifting, Ribosomal; Genome, Mitochondrial; Molecular Sequence Data; Nucleic Acid Conformation; Open Reading Frames; Porifera/genetics; RNA, Transfer/chemistry; RNA, Transfer/genetics; Sequence Homology, Amino Acid; Species Specificity

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