PMID:17626621

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Citation

Thomas-Chollier, M, Leyns, L and Ledent, V (2007) HoxPred: automated classification of Hox proteins using combinations of generalised profiles. BMC Bioinformatics 8:247

Abstract

Correct identification of individual Hox proteins is an essential basis for their study in diverse research fields. Common methods to classify Hox proteins focus on the homeodomain that characterise homeobox transcription factors. Classification is hampered by the high conservation of this short domain. Phylogenetic tree reconstruction is a widely used but time-consuming classification method.

Links

PubMed PMC1965487 Online version:10.1186/1471-2105-8-247

Keywords

Algorithms; Amino Acid Sequence; Animals; Artificial Intelligence; Fishes/metabolism; Homeodomain Proteins/chemistry; Homeodomain Proteins/classification; Molecular Sequence Data; Pattern Recognition, Automated/methods; Sequence Alignment/methods; Sequence Analysis, Protein/methods; Sequence Homology, Amino Acid

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