PMID:16381902
| Citation |
Heiges, M, Wang, H, Robinson, E, Aurrecoechea, C, Gao, X, Kaluskar, N, Rhodes, P, Wang, S, He, CZ, Su, Y, Miller, J, Kraemer, E and Kissinger, JC (2006) CryptoDB: a Cryptosporidium bioinformatics resource update. Nucleic Acids Res. 34:D419-22 |
|---|---|
| Abstract |
The database, CryptoDB (http://CryptoDB.org), is a community bioinformatics resource for the AIDS-related apicomplexan-parasite, Cryptosporidium. CryptoDB integrates whole genome sequence and annotation with expressed sequence tag and genome survey sequence data and provides supplemental bioinformatics analyses and data-mining tools. A simple, yet comprehensive web interface is available for mining and visualizing the data. CryptoDB is allied with the databases PlasmoDB and ToxoDB via ApiDB, an NIH/NIAID-fundedBioinformatics Resource Center. Recent updates to CryptoDB include the deposition of annotated genome sequences for Cryptosporidium parvum and Cryptosporidium hominis, migration to a relational database (GUS), a new query and visualization interface and the introduction of Web services. |
| Links |
PubMed PMC1347441 Online version:10.1093/nar/gkj078 |
| Keywords |
Animals; Computational Biology; Cryptosporidium/genetics; Cryptosporidium parvum/genetics; Databases, Genetic; Genome, Protozoan; Genomics; Internet; Protozoan Proteins/chemistry; Protozoan Proteins/genetics; Software; User-Computer Interface |
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