PMID:15601465

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Citation

Ghai, R, Hain, T and Chakraborty, T (2004) GenomeViz: visualizing microbial genomes. BMC Bioinformatics 5:198

Abstract

An increasing number of microbial genomes are being sequenced and deposited in public databases. In addition, several closely related strains are also being sequenced in order to understand the genetic basis of diversity and mechanisms that lead to the acquisition of new genetic traits. These exercises have necessitated the requirement for visualizing microbial genomes and performing genome comparisons on a finer scale. We have developed GenomeViz to enable rapid visualization and subsequent comparisons of several microbial genomes in an interactive environment.

Links

PubMed PMC544189 Online version:10.1186/1471-2105-5-198

Keywords

Bacterial Proteins/chemistry; Bacterial Proteins/classification; Bacterial Proteins/genetics; Computer Graphics; CpG Islands/genetics; Escherichia coli K12/genetics; GC Rich Sequence/genetics; Genes, Bacterial/genetics; Genome, Bacterial; Listeria/genetics; Software; Species Specificity

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