PMID:15513998

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Citation

Kiryu, H, Oshima, T and Asai, K (2005) Extracting relations between promoter sequences and their strengths from microarray data. Bioinformatics 21:1062-8

Abstract

The relations between the promoter sequences and their strengths were extensively studied in the 1980s. Although these studies uncovered strong sequence-strength correlations, the cost of their elaborate experimental methods have been too high to be applied to a large number of promoters. On the contrary, a recent increase in the microarray data allows us to compare thousands of gene expressions with their DNA sequences.

Links

PubMed Online version:10.1093/bioinformatics/bti094

Keywords

Algorithms; Artificial Intelligence; Escherichia coli/genetics; Escherichia coli Proteins/genetics; Gene Expression Profiling/methods; Models, Biological; Models, Statistical; Oligonucleotide Array Sequence Analysis/methods; Pattern Recognition, Automated/methods; Promoter Regions, Genetic/genetics; Sequence Analysis, DNA/methods

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