PMID:11551215

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Citation

Boehlein, SK, Nakatsu, T, Hiratake, J, Thirumoorthy, R, Stewart, JD, Richards, NG and Schuster, SM (2001) Characterization of inhibitors acting at the synthetase site of Escherichia coli asparagine synthetase B. Biochemistry 40:11168-75

Abstract

Asparagine synthetase catalyzes the ATP-dependent formation of L-asparagine from L-aspartate and L-glutamine, via a beta-aspartyl-AMP intermediate. Since interfering with this enzyme activity might be useful for treating leukemia and solid tumors, we have sought small-molecule inhibitors of Escherichia coli asparagine synthetase B (AS-B) as a model system for the human enzyme. Prior work showed that L-cysteine sulfinic acid competitively inhibits this enzyme by interfering with L-aspartate binding. Here, we demonstrate that cysteine sulfinic acid is also a partial substrate for E. coli asparagine synthetase, acting as a nucleophile to form the sulfur analogue of beta-aspartyl-AMP, which is subsequently hydrolyzed back to cysteine sulfinic acid and AMP in a futile cycle. While cysteine sulfinic acid did not itself constitute a clinically useful inhibitor of asparagine synthetase B, these results suggested that replacing this linkage by a more stable analogue might lead to a more potent inhibitor. A sulfoximine reported recently by Koizumi et al. as a competitive inhibitor of the ammonia-dependent E. coli asparagine synthetase A (AS-A) [Koizumi, M., Hiratake, J., Nakatsu, T., Kato, H., and Oda, J. (1999) J. Am. Chem. Soc. 121, 5799-5800] can be regarded as such a species. We found that this sulfoximine also inhibited AS-B, effectively irreversibly. Unlike either the cysteine sulfinic acid interaction with AS-B or the sulfoximine interaction with AS-A, only AS-B productively engaged in asparagine synthesis could be inactivated by the sulfoximine; free enzyme was unaffected even after extended incubation with the sulfoximine. Taken together, these results support the notion that sulfur-containing analogues of aspartate can serve as platforms for developing useful inhibitors of AS-B.

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Keywords

Adenosine Monophosphate/analogs & derivatives; Adenosine Monophosphate/pharmacology; Adenosine Triphosphate/metabolism; Asparagine/biosynthesis; Carbon-Nitrogen Ligases with Glutamine as Amide-N-Donor/antagonists & inhibitors; Cysteine/analogs & derivatives; Cysteine/pharmacology; Enzyme Inhibitors/pharmacology; Escherichia coli/enzymology; Hydrolysis; Methionine Sulfoximine/analogs & derivatives; Methionine Sulfoximine/pharmacology; Models, Chemical; Neurotransmitter Agents; Nuclear Magnetic Resonance, Biomolecular; Phosphorus Isotopes; Spectrometry, Mass, Electrospray Ionization

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