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Protein structure models by homology modeling
Last Updated: May 2005
FAMSBASE requires a login for full access, but an anonymous public login says that it allows searching for ORFs with 3D models.
Following the public login link, many queries take you to a page that asks you to create an account. However, without creating an account, you can view a list of Proteins with FAMSBASE models. This can be restricted to a particular genome by clicking a checkbox for the desired genome. The output gives psiblast scores and links to other FAMSBASE analysis pages (which need a login) and to GTOP. The ones I tested did not link properly to GTOP.
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- Yamaguchi, A et al. (2003) Enlarged FAMSBASE: protein 3D structure models of genome sequences for 41 species. Nucleic Acids Res. 31 463-8 PubMed