PortEco Microarray Pipeline
| Title/Dataset Description | Reference | Platform | GEO Accession | ArrayExpress Accession | Data loaded | Curation completed | Notes | category/subcat | date started |
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Transcription profiling by array of differential utilization of carbon sources in Escherichia coli based on previous nutritional conditions |
E-MEXP-3800 |
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E-MEXP-3799 |
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E-GEOD-43325 |
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E-GEOD-29076 |
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E-GEOD-42702 |
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E-GEOD-34991 |
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E-GEOD-37026 |
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E-MTAB-1347 |
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E-GEOD-21820 |
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E-GEOD-22285 |
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E-GEOD-40693 |
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E-GEOD-40648 |
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E-GEOD-21652 |
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E-GEOD-36779 |
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E-GEOD-20380 |
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E-GEOD-39607 |
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E-GEOD-30679 |
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E-GEOD-30692 |
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E-GEOD-30424 |
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E-GEOD-34046 |
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E-GEOD-21857 |
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E-TABM-86 |
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E-GEOD-29803 |
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E-GEOD-40427 |
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E-GEOD-33212 |
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E-GEOD-42205 |
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E-GEOD-40557 |
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E-GEOD-39439 |
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E-GEOD-35049 |
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E-GEOD-35822 |
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E-GEOD-41093 |
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E-GEOD-41940 |
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E-GEOD-41938 |
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E-GEOD-26223 |
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E-MTAB-996 |
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Genome-wide transcription analysis of Escherichia coli in response to extremely low-frequency magnetic fields |
http://www.ncbi.nlm.nih.gov/pubmed/22331529 |
Affymetrix E. coli Genome 2.0 Array |
GSE35371 |
E-GEOD-35371 |
in process |
JD |
Transcript profiling/Magnetic field |
02/25/13 | |
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Evolution of gene expression during long term coexistence in a bacterial evolution experiment |
http://www.ncbi.nlm.nih.gov/pubmed/22645336 |
Affymetrix E. coli Genome 2.0 Array |
GSE30639 |
E-GEOD-30639 |
in process |
JD |
evolution/chemostat |
02/26/13 | |
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Global transcription profiling of E. coli strains CFT073, Nissle 1917 and 83972 grown exponentially in MOPS, exponentially in human urine and in biofilms in human urine. |
http://www.ncbi.nlm.nih.gov/pubmed/20886356 |
Affymetrix GeneChip E.coli Genome 2.0 Array |
E-MEXP-2609 |
in process |
JD |
biofilm/urine |
02/26/13 | ||
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