lsrA:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
imported>Wikientrybot
No edit summary
Update TableEdit tables.
Line 24: Line 24:
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->{{Quickview_table_help}}
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{| id="F49aeeb7d8f67a" class=" tableEdit New_Quickview_Table"


|-
|-
!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
||
||
''lsrA''  
''lsrA''  
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
||
||
''ego, ECK1506, b1513, JW1506, ydeX''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ego, ECK1506, b1513, JW1506, ydeX''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
||
||
LsrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
LsrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
Line 43: Line 43:
Autoinducer-2 (AI-2) uptake; essential for aerobic growth; upregulated in biofilms<ref name='LIB:EcoGene'/>
Autoinducer-2 (AI-2) uptake; essential for aerobic growth; upregulated in biofilms<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
||
||
fused AI2 transporter subunits of ABC superfamily: ATP-binding components<ref name='LIB:Riley_2006'/>, B1513<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ego<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
fused AI2 transporter subunits of ABC superfamily: ATP-binding components<ref name='LIB:Riley_2006'/>, B1513<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ego<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
||
||


|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:lsrACDBFG|lsrACDBFG]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:lsrACDBFG|lsrACDBFG]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
||
||




|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.4775.F49aeeb7d8f67a&page=4775&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table] ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.4775.F49aeeb7d8f67a&page=4775&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.4775.F49aeeb7d8f67a--></protect>
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.4775.F49aeeb7d8f67a--></protect>

Revision as of 02:00, 9 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

lsrA

Gene Synonym(s)

ego, ECK1506, b1513, JW1506, ydeX[1][2]

Product Desc.

LsrA[2][3];

Component of LsrA/LsrC/LsrD/LsrB ABC transporter[2][3]

Autoinducer-2 (AI-2) uptake; essential for aerobic growth; upregulated in biofilms[4]

Product Synonyms(s)

fused AI2 transporter subunits of ABC superfamily: ATP-binding components[1], B1513[2][1], YdeX[2][1], Ego[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): lsrACDBFG[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


LsrA is paralogous to ribose transport ATPase RbsA. LsrA is in an operon regulated by LsrR and LuxS, through AI-2. Biofilm microarray result was validated with RT-PCR. CRP regulon.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=lsrA:Quickview&oldid=981605"