hcaD:Evolution: Difference between revisions

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Revision as of 01:31, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000017177 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000017223 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G27820 (score: 1.000; bootstrap: 100%)
  • AT3G52880 (score: 0.389)
  • AT5G03630 (score: 0.369)
  • AT3G09940 (score: 0.330)
  • AT1G63940 (score: 0.254)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000008987 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00032461 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017640 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000027660 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000015763 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030826-11 (score: 1.000; bootstrap: 93%)
  • ZDB-CDNA-041024-20 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0191137 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0025628 (score: 1.000; bootstrap: 69%)
  • FBgn0032754 (score: 0.425)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18023-PA (score: 1.000; bootstrap: 69%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000012504 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000335369 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000026974 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000021990 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Mus musculus

  • MGI:1919418 (score: 1.000; bootstrap: 87%)

From Inparanoid:20070104

Oryza gramene

  • Q652L6 (score: 1.000; bootstrap: 100%)
  • Q6ZJ08 (score: 1.000; bootstrap: 100%)
  • Q9XFZ3 (score: 0.996)
  • Q9SXX0 (score: 0.906)
  • Q8S3R2 (score: 0.477)
  • Q8S3R1 (score: 0.461)
  • Q84PW3 (score: 0.350)
  • Q93YH5 (score: 0.282)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000024275 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000008503 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC26F14c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000176750 (score: 1.000; bootstrap: 91%)
  • NEWSINFRUP00000144261 (score: 0.509)
  • NEWSINFRUP00000155022 (score: 0.375)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00029940001 (score: 1.000; bootstrap: 81%)
  • GSTENP00029547001 (score: 0.333)
  • GSTENP00033345001 (score: 0.169)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000039439 (score: 1.000; bootstrap: 53%)

From Inparanoid:20070104

E. coli O157

HCAD

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00070


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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