gnsB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''gnsB''  
''gnsB''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK1544, b1550, JW5253, ydfY''<ref name='LIB:Riley_2006'/>
''ECK1544, b1550, JW5253, ydfY''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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Qin prophage; predicted protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Qin prophage; predicted protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Multicopy suppressor of secG(Cs) and fabA6(Ts), Qin prophage; overexpression increases unsaturated fatty acid content of phospholipids; gnsA paralog<ref name='LIB:EcoGene'/>
Multicopy suppressor of secG(Cs) and fabA6(Ts), Qin prophage; overexpression increases unsaturated fatty acid content of phospholipids; gnsA paralog<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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Qin prophage; predicted protein<ref name='LIB:Riley_2006'/>, B1550<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GnsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdfY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
Qin prophage; predicted protein<ref name='LIB:Riley_2006'/>, B1550<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GnsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdfY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:gnsB|gnsB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:gnsB|gnsB]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 01:26, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

gnsB

Gene Synonym(s)

ECK1544, b1550, JW5253, ydfY[1]

Product Desc.

Qin prophage; predicted protein[2][3]

Multicopy suppressor of secG(Cs) and fabA6(Ts), Qin prophage; overexpression increases unsaturated fatty acid content of phospholipids; gnsA paralog[4]

Product Synonyms(s)

Qin prophage; predicted protein[1], B1550[2][1], GnsB[2][1], YdfY[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gnsB[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The Escherichia coli CFT073 gnsB ortholog is annotated as an 88 amino acid protein due to extension of N-terminus. However, homology does not extend into upstream region and K-12 has an in-frame stop in N-terminal extension region. Therefore GnsB of CFT073 is probably also 57 aa long. Conservation with GnsA paralog and presence of excellent gnsB RBS also supports this conclusion. ALT_INIT of -1 is indicated to allow acceptable spacing between the ATG and the RBS.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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