fimC:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''fimC''  
''fimC''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK4307, b4316, JW4279, pil, pilB, pilC''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK4307, b4316, JW4279, pil, pilB, pilC''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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periplasmic chaperone, required for type 1 fimbriae<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
periplasmic chaperone, required for type 1 fimbriae<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Periplasmic chaperone for type 1 fimbriae; FimCD chaperone-usher transport<ref name='LIB:EcoGene'/>
Periplasmic chaperone for type 1 fimbriae; FimCD chaperone-usher transport<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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chaperone, periplasmic product<ref name='LIB:Riley_2006'/>, B4316 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilC product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FimC product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
chaperone, periplasmic product<ref name='LIB:Riley_2006'/>, B4316 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilC product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PilB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FimC product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:fimAICDFGH|fimAICDFGH]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:fimAICDFGH|fimAICDFGH]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 01:04, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

fimC

Gene Synonym(s)

ECK4307, b4316, JW4279, pil, pilB, pilC[1][2]

Product Desc.

periplasmic chaperone, required for type 1 fimbriae[2][3]

Periplasmic chaperone for type 1 fimbriae; FimCD chaperone-usher transport[4]

Product Synonyms(s)

chaperone, periplasmic product[1], B4316 product[2][1], PilC product[2][1], PilB product[2][1], FimC product[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fimAICDFGH[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


FimC has Ig-like domains: pfam PF00345 aligns to N-terminal residues 37-157, and pfam PF02753 aligns to C-terminal residues 161-237. First 36 aa are a type I signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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