SGD: Difference between revisions
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===Discussion of {{PAGENAME}} on other websites=== | ===Discussion of {{PAGENAME}} on other websites=== | ||
Revision as of 00:04, 19 June 2009
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| Link/URL: | |
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| What: |
Comprehensive data resource for S. cerevisiae (baker's yeast) |
| Who: |
Mike Cherry, Stanford Univ. |
| Updates: | |
| Upcoming events: | |
| Web Services: |
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| edit table |
About SGD
The Saccharomyces Genome Database (SGD) project collects information and maintains a database of the molecular biology of the yeast Saccharomyces cerevisiae. This database includes a variety of genomic and biological information and is maintained and updated by SGD curators. The SGD also maintains the S. cerevisiae Gene Name Registry, a complete list of all gene names used in S. cerevisiae. We have also compiled a set of general guidelines to gene naming that may be of help to researchers who are naming new S. cerevisiae genes.
Content
Sequences of yeast genes and proteins
Descriptions and classifications of:
- biological roles
- molecular functions
- subcellular localizations
Links to:
- literature information
- functional genomics datasets
- tools for analysis and comparison of sequences
Using SGD
Browsing
Searching
Basic Searches:
- gene name, product, or description
- name of protein or protein complex
- GO terms
- GO IDs
- colleagues or authors
- biochemical pathways
- Pubmed ID
- gene summary paragraphs
- abstracts
- name descriptions
- phenotypes
- locus history notes
Advanced Searches:
- chromosomal feature (ORF, ARS, centromere, etc.)
- protein properties
- phenotypic properties
- interaction properties
- biological process
- molecular function
- cellular component
- results of a large-scale expression
Usage examples
Add links to additional pages describing success stories here.
Technology
Web Services/API
Discussion
References
See Help:References for how to manage references in EcoliWiki. Cherry JM, Ball C, Weng S, Juvik G, Schmidt R, Adler C, Dunn B, Dwight S, Riles L, Mortimer RK, Botstein D Nature 1997 387(6632 Suppl):67-73 Genetic and physical maps of Saccharomyces cerevisiae.