yicR:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
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''yicR'' | |||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3628, b3638, JW5643, radC''<ref name='LIB:Riley_2006'/> | |||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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hypothetical protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | |||
Function unknown; mistakenly thought to be allelic to radC102 (corrected by Lombardo, 2000)<ref name='LIB:EcoGene'/> | |||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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protein associated with replication fork, possible DNA repair protein<ref name='LIB:Riley_2006'/>, B3638<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YicR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RadC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:yicR-rpmBG|yicR-rpmBG]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:yicR-rpmBG-mutM|yicR-rpmBG-mutM]]<ref name='LIB:EcoCyc10.6'/> | |||
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!align=left {{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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Revision as of 20:13, 5 March 2009
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yicR |
|---|---|
| Gene Synonym(s) |
ECK3628, b3638, JW5643, radC[1] |
| Product Desc. |
Function unknown; mistakenly thought to be allelic to radC102 (corrected by Lombardo, 2000)[4] |
| Product Synonyms(s) |
protein associated with replication fork, possible DNA repair protein[1], B3638[2][1], YicR[2][1], RadC[2][1] |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): yicR-rpmBG[2], yicR-rpmBG-mutM[2] |
| Regulation/Activity |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
yicR is paralogous to cryptic prophage genes yfjY, ykfG, yeeS, although they lack the N-terminal helix-hairpin-helix (HhH) domain of YicR. CreBC regulon. yicR is predicted to have a CRP-S promoter co-regulated by both Crp and Sxy (Cameron, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.