ydaM:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
imported>Wikientrybot
Adding EcoGene Comments
imported>Wikientrybot
No edit summary
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.4439.X46a99ddd3ce57-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.4439.G49b02c503d947-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->{{Quickview_table_help}}
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  


|-
|-
!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
||
[[ydaM:Gene|''ydaM]]'' (synonyms: ''ECK1338, b1341, JW5206'')<ref name='LIB:Riley_2006'/>
|-
|-
!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
||
[[ydaM:Gene_Product(s)|YdaM product]]<ref name='LIB:Riley_2006'/>: predicted diguanylate cyclase, GGDEF domain signalling protein product, B1341 product
|-
|-
!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
||
|-
diguanylate cyclase<ref name='LIB:EcoCyc10.6'/> diguanylate cyclase, transcriptional modulator<ref name='LIB:EcoCyc11.1'/>
!align=left {{table_heading_style}} |Product Synonyms(s)
 
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:ydaM|ydaM]]<ref name='LIB:EcoCyc10.6'/>
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||


|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.4439.X46a99ddd3ce57&page=4439&pagename={{FULLPAGENAMEE}}&type=1&template=Quickview_table edit table] ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.4439.G49b02c503d947&page=4439&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.4439.X46a99ddd3ce57-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.4439.G49b02c503d947--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>

Revision as of 19:47, 5 March 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name
Gene Synonym(s)
Product Desc.
Product Synonyms(s)
Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YdaM has a central PAS domain, then a C-terminal diguanylate cyclase GGDEF domain. RpoS regulon (Weber, 2006). YdaM expression is thermoregulated and may act as a thermosensor for curli control (Weber, 2006). YdaM/Gmr(YciR) constitute an RpoS-regulated c-di-GMP synthesis/degradation module inversely regulated by Hns and controlling the expression of curli genes (Weber, 2006). YdaM has diguanylate cyclase activity in vitro (Weber, 2006).[1]



References

[back to top]


  1. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.