ispH:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
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''ispH'' | |||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0030, b0029, JW0027, lytB, yaaE''<ref name='LIB:Riley_2006'/> | |||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | |||
Last, branched, step of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) synthesis from 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis<ref name='LIB:EcoGene'/> | |||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein<ref name='LIB:Riley_2006'/>, B0029<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaaE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LytB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:lsp-fkpB-ispH|lsp-fkpB-ispH]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:ribF-ileS-lspA-fkpB-ispH|ribF-ileS-lspA-fkpB-ispH]]<ref name='LIB:EcoCyc10.6'/>, ileS-lsp, ileS-lspA-lytB, ribF-ileS-lspA-slpA-lytB | |||
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!align=left {{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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Revision as of 20:54, 4 March 2009
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ispH |
|---|---|
| Gene Synonym(s) |
ECK0030, b0029, JW0027, lytB, yaaE[1] |
| Product Desc. |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase[2][3] Last, branched, step of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) synthesis from 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis[4] |
| Product Synonyms(s) |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein[1], B0029[2][1], YaaE[2][1], LytB[2][1], IspH[2][1] |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): lsp-fkpB-ispH[2], ribF-ileS-lspA-fkpB-ispH[2], ileS-lsp, ileS-lspA-lytB, ribF-ileS-lspA-slpA-lytB |
| Regulation/Activity |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The ispH gene is essential. IspH contains a [4Fe-4S] cluster. IspH affects penicillin tolerance and the stringent response.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.