gadE:Quickview: Difference between revisions
imported>Wikientrybot No edit summary |
imported>Wikientrybot No edit summary |
||
| Line 28: | Line 28: | ||
|- | |- | ||
!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
|| | |||
''gadE'' | |||
|- | |- | ||
!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | |||
''ECK3496, b3512, JW3480, yhiE, yhiT''<ref name='LIB:Riley_2006'/> | |||
|- | |- | ||
!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
|| | |||
GadE transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | |||
Transcriptional regulator of the gadABC operon<ref name='LIB:EcoGene'/> | |||
|- | |- | ||
!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | |||
DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, B3512<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhiT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhiE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GadE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, acid-responsive regulator of gadA and gadBC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | |||
|- | |- | ||
!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
Sensitive to pH below pH 2.5 | |||
|- | |- | ||
!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
|| | |||
transcription unit(s): [[:Category:Txn_unit:gadE|gadE]]<ref name='LIB:EcoCyc10.6'/> | |||
|- | |- | ||
!align=left {{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | |||
Activated by EvgA, YdeO, GadX, GadW, GadE, MnmE(indirect?) | |||
|-class='sortbottom' | |-class='sortbottom' | ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.8754.U49aee6cab2043&page=8754&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table] | |[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.8754.U49aee6cab2043&page=8754&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table] || | ||
|} | |} | ||
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.8754.U49aee6cab2043--></protect> | <!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.8754.U49aee6cab2043--></protect> | ||
Revision as of 20:38, 4 March 2009
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
gadE |
|---|---|
| Gene Synonym(s) |
ECK3496, b3512, JW3480, yhiE, yhiT[1] |
| Product Desc. |
GadE transcriptional activator[2][3] Transcriptional regulator of the gadABC operon[4] |
| Product Synonyms(s) |
DNA-binding transcriptional activator[1], B3512[2][1], YhiT[2][1], YhiE[2][1], GadE[2][1], acid-responsive regulator of gadA and gadBC[2][1] |
| Knock-Out Phenotype |
Sensitive to pH below pH 2.5 |
| Regulation/Expression | |
| Regulation/Activity |
Activated by EvgA, YdeO, GadX, GadW, GadE, MnmE(indirect?) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
GadE overexpression confers acid resistance. GadE is induced by YdeO overexpression. GadE is in the EvgAS regulon. GadE is a LuxR family regulator. GadE is possibly involved in the regulation of type III secretion systems in enterohemorrhagic E. coli O157:H7. Required for stationary phase-induced, pH 5.5 growth medium-induced, and EvgA-induced acid resistance[4]
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.