rsmE:Quickview: Difference between revisions
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YggJ is RsmE; although growth is not obviously impaired, wildtype outcompetes rsmE- (Basturea, 2006). Member of the m(3)U MTases family DUF558 and the SAM MTase alpha/beta knot superfamily. Exponential reduction in cell growth only observed when co-cultured with wild type. The N-terminal domain (1-72) resembles an RNA binding domain. RrmA and YibK are structural paralogs. otherPDB (H. influenzae): 1NXZ, 1VHX. AFMB Structural Genomics target No. 129 (http://afmb.cnrs-mrs.fr/article171.html).<ref name='LIB:EcoGene'/> | |||
Revision as of 02:07, 3 March 2009
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Gene Name | |
|---|---|
| Product(s) |
YggJ product[1]: predicted protein product, B2946 product, RsmE product |
| Description |
16S rRNA m(3)U1498 methyltransferase[2] 16S rRNA m3U1498 methyltransferase[3] |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YggJ is RsmE; although growth is not obviously impaired, wildtype outcompetes rsmE- (Basturea, 2006). Member of the m(3)U MTases family DUF558 and the SAM MTase alpha/beta knot superfamily. Exponential reduction in cell growth only observed when co-cultured with wild type. The N-terminal domain (1-72) resembles an RNA binding domain. RrmA and YibK are structural paralogs. otherPDB (H. influenzae): 1NXZ, 1VHX. AFMB Structural Genomics target No. 129 (http://afmb.cnrs-mrs.fr/article171.html).[4]
References
- ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.