yebF:Quickview: Difference between revisions

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===Notes===
===Notes===
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YebF is secreted into the periplasm normally, then exported into the medium by an unknown mechanism. C-terminal fusions are also exported. The lipoprotein prediction is a proven false positive; the Cys is not conserved. First 21 aa are a cleaved signal peptide. First ATG has no RBS and is not conserved in Salmonella; second ATG has good RBS and was used to translate cloned yebF.<ref name='LIB:EcoGene'/>





Revision as of 01:35, 3 March 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Gene Name

yebF (synonyms: ECK1848, b1847, JW1836)[1]

Product(s)

YebF product[1]: predicted protein product, B1847 product

Description

predicted protein[2][3]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yebF[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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YebF is secreted into the periplasm normally, then exported into the medium by an unknown mechanism. C-terminal fusions are also exported. The lipoprotein prediction is a proven false positive; the Cys is not conserved. First 21 aa are a cleaved signal peptide. First ATG has no RBS and is not conserved in Salmonella; second ATG has good RBS and was used to translate cloned yebF.[4]



References

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  1. ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.