treC:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
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''Dictyostelium discoideum''   
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''Macaca mulatta''   
''Macaca mulatta''   
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''Monodelphis domestica''   
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''Mus musculus''   
''Mus musculus''   
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''Saccharomyces cerevisiae''   
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''Schizosaccharomyces pombe''   
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''Takifugu rubripes''   
''Takifugu rubripes''   
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00128 PFAM:PF00128]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00128 PFAM:PF00128]
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===Notes===
===Notes===
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
<noinclude>
<noinclude>

Revision as of 22:01, 21 January 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000029063 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000014374 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000008418 (score: 0.306)
  • ENSAPMP00000024487 (score: 0.161)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000023161 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00032258 (score: 1.000; bootstrap: 100%)
  • WBGene00023839 (score: 0.120)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00000225 (score: 1.000; bootstrap: 100%)
  • WBGene00000224 (score: 0.145)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000003699 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-000831-3 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-853 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1734 (score: 0.392)
  • ZDB-CDNA-040425-1733 (score: 0.382)
  • ZDB-GENE-040122-2 (score: 0.382)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0204945 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0032382 (score: 1.000; bootstrap: 100%)
  • FBgn0032381 (score: 0.500)
  • FBgn0050359 (score: 0.288)
  • FBgn0002570 (score: 0.281)
  • FBgn0033296 (score: 0.281)
  • FBgn0033294 (score: 0.274)
  • FBgn0002571 (score: 0.270)
  • FBgn0033297 (score: 0.266)
  • FBgn0050360 (score: 0.262)
  • FBgn0002569 (score: 0.182)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA13361-PA (score: 1.000; bootstrap: 100%)
  • GA13362-PA (score: 0.498)
  • GA21261-PA (score: 0.273)
  • GA15787-PA (score: 0.267)
  • GA21264-PA (score: 0.263)
  • GA21263-PA (score: 0.199)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000016193 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000260649 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000008308 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000000845 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1195264 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000020401 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000009581 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YGR287C (score: 1.000; bootstrap: 100%)
  • YOL157C (score: 0.932)
  • YJL221C (score: 0.929)
  • YIL172C (score: 0.929)
  • YBR299W (score: 0.646)
  • YGR292W (score: 0.645)
  • YJL216C (score: 0.539)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC16837 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000156856 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000005991 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

TREC

From SHIGELLACYC

E. coli O157

TREC

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00128


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Notes

Links

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Name URL Comments
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References

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Categories

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