aqpZ:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00230 PFAM:PF00230]
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===Notes===
===Notes===
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==References==
==References==
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{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
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Revision as of 21:46, 21 January 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000016718 (score: 1.000; bootstrap: 92%)
  • ENSANGP00000016769 (score: 0.103)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000003796 (score: 1.000; bootstrap: 89%)
  • ENSAPMP00000032397 (score: 0.078)
  • ENSAPMP00000029623 (score: 0.070)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G19030 (score: 1.000; bootstrap: 84%)
  • AT4G18910 (score: 0.770)
  • AT2G34390 (score: 0.390)
  • AT5G37810 (score: 0.333)
  • AT5G37820 (score: 0.324)
  • AT1G31885 (score: 0.309)
  • AT4G10380 (score: 0.178)
  • AT1G80760 (score: 0.171)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000038149 (score: 1.000; bootstrap: 90%)
  • ENSBTAP00000011024 (score: 0.452)
  • ENSBTAP00000016984 (score: 0.329)
  • ENSBTAP00000013360 (score: 0.306)
  • ENSBTAP00000025341 (score: 0.194)
  • ENSBTAP00000000993 (score: 0.191)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038598 (score: 1.000; bootstrap: 100%)
  • WBGene00031219 (score: 0.281)
  • WBGene00031159 (score: 0.262)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00000172 (score: 1.000; bootstrap: 100%)
  • WBGene00000174 (score: 0.307)
  • WBGene00000173 (score: 0.242)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000012304 (score: 1.000; bootstrap: 81%)
  • ENSCAFP00000000190 (score: 0.476)
  • ENSCAFP00000012296 (score: 0.392)
  • ENSCAFP00000026782 (score: 0.282)
  • ENSCAFP00000004614 (score: 0.256)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040724-152 (score: 1.000; bootstrap: 66%)
  • ZDB-CDNA-040808-6 (score: 1.000; bootstrap: 67%)
  • ZDB-GENE-030131-7764 (score: 0.225)
  • ZDB-CDNA-040425-3363 (score: 0.222)
  • ZDB-CDNA-040801-44 (score: 0.220)
  • ZDB-GENE-040801-41 (score: 0.220)
  • ZDB-CDNA-050706-35 (score: 0.203)
  • ZDB-GENE-050706-86 (score: 0.203)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0015872 (score: 1.000; bootstrap: 100%)
  • FBgn0033635 (score: 0.142)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA20580-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000008350 (score: 1.000; bootstrap: 75%)
  • ENSGALP00000016674 (score: 0.257)
  • ENSGALP00000024367 (score: 0.249)
  • ENSGALP00000013592 (score: 0.078)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000293599 (score: 1.000; bootstrap: 100%)
  • ENSP00000199280 (score: 0.564)
  • ENSP00000320247 (score: 0.406)
  • ENSP00000257979 (score: 0.393)
  • ENSP00000341388 (score: 0.283)
  • ENSP00000311165 (score: 0.247)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000013540 (score: 1.000; bootstrap: 99%)
  • ENSMMUP00000030182 (score: 0.491)
  • ENSMMUP00000019590 (score: 0.278)
  • ENSMMUP00000015441 (score: 0.275)
  • ENSMMUP00000028555 (score: 0.243)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000000292 (score: 1.000; bootstrap: 85%)
  • ENSMODP00000026878 (score: 0.311)

From Inparanoid:20070104

Mus musculus

  • MGI:106215 (score: 1.000; bootstrap: 87%)
  • MGI:1096865 (score: 0.535)
  • MGI:1341204 (score: 0.373)
  • MGI:96990 (score: 0.350)
  • MGI:107387 (score: 0.270)
  • MGI:103201 (score: 0.206)

From Inparanoid:20070104

Oryza gramene

  • Q40746 (score: 1.000; bootstrap: 68%)
  • Q6EUF4 (score: 1.000; bootstrap: 69%)
  • Q9ATN4 (score: 0.760)
  • Q5W6J2 (score: 0.564)
  • Q5QN31 (score: 0.464)
  • Q5Z9E2 (score: 0.413)
  • Q6Z2T3 (score: 0.187)
  • Q67WJ8 (score: 0.187)
  • Q9ATN2 (score: 0.182)
  • Q9ATN3 (score: 0.182)
  • Q9AT74 (score: 0.180)
  • Q9FW73 (score: 0.169)
  • Q9ATN1 (score: 0.159)
  • Q84S07 (score: 0.102)
  • Q7EYH7 (score: 0.095)
  • Q9ASI1 (score: 0.060)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000008403 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000008404 (score: 0.414)
  • ENSPTRP00000008676 (score: 0.396)
  • ENSPTRP00000008402 (score: 0.289)
  • ENSPTRP00000016898 (score: 0.279)
  • ENSPTRP00000032543 (score: 0.246)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000024102 (score: 1.000; bootstrap: 87%)
  • ENSRNOP00000044710 (score: 0.464)
  • ENSRNOP00000040588 (score: 0.320)
  • ENSRNOP00000004223 (score: 0.307)
  • ENSRNOP00000041720 (score: 0.233)
  • ENSRNOP00000015692 (score: 0.186)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000130258 (score: 1.000; bootstrap: 63%)
  • NEWSINFRUP00000161827 (score: 0.260)
  • NEWSINFRUP00000127844 (score: 0.245)
  • NEWSINFRUP00000162705 (score: 0.206)
  • NEWSINFRUP00000127840 (score: 0.105)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00023672001 (score: 1.000; bootstrap: 69%)
  • GSTENP00028132001 (score: 0.869)
  • GSTENP00002753001 (score: 0.625)
  • GSTENP00016124001 (score: 0.270)
  • GSTENP00028331001 (score: 0.236)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000047158 (score: 1.000; bootstrap: 79%)
  • ENSXETP00000043976 (score: 0.426)
  • ENSXETP00000015130 (score: 0.262)
  • ENSXETP00000012520 (score: 0.235)
  • ENSXETP00000022885 (score: 0.131)

From Inparanoid:20070104

Shigella flexneri

AQPZ

From SHIGELLACYC

E. coli O157

AQPZ

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00230


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Notes

Links

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References

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