betA:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00732 PFAM:PF00732]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00732 PFAM:PF00732]
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===Notes===
===Notes===
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
<noinclude>
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Revision as of 21:44, 21 January 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000024305 (score: 1.000; bootstrap: 98%)
  • ENSANGP00000015190 (score: 0.448)
  • ENSANGP00000012795 (score: 0.221)
  • ENSANGP00000022822 (score: 0.219)
  • ENSANGP00000015865 (score: 0.206)
  • ENSANGP00000002989 (score: 0.205)
  • ENSANGP00000025265 (score: 0.204)
  • ENSANGP00000005507 (score: 0.178)
  • ENSANGP00000012169 (score: 0.150)
  • ENSANGP00000005577 (score: 0.133)
  • ENSANGP00000015052 (score: 0.132)
  • ENSANGP00000027087 (score: 0.127)
  • ENSANGP00000016488 (score: 0.101)
  • ENSANGP00000005557 (score: 0.091)
  • ENSANGP00000005452 (score: 0.086)
  • ENSANGP00000026044 (score: 0.083)
  • ENSANGP00000002145 (score: 0.083)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000013035 (score: 1.000; bootstrap: 98%)
  • ENSAPMP00000002616 (score: 0.375)
  • ENSAPMP00000012876 (score: 0.121)
  • ENSAPMP00000012972 (score: 0.095)
  • ENSAPMP00000012902 (score: 0.093)
  • ENSAPMP00000029877 (score: 0.080)
  • ENSAPMP00000006409 (score: 0.078)
  • ENSAPMP00000032879 (score: 0.072)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G12570 (score: 1.000; bootstrap: 100%)
  • AT5G51950 (score: 0.480)
  • AT3G56060 (score: 0.468)
  • AT1G72970 (score: 0.417)
  • AT5G51930 (score: 0.411)
  • AT1G73050 (score: 0.343)
  • AT1G14185 (score: 0.240)
  • AT1G14190 (score: 0.237)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000013227 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00032297 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00007917 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000012205 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007524 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0187375 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0030592 (score: 1.000; bootstrap: 99%)
  • FBgn0030598 (score: 0.334)
  • FBgn0030590 (score: 0.327)
  • FBgn0030591 (score: 0.278)
  • FBgn0039415 (score: 0.183)
  • FBgn0030596 (score: 0.154)
  • FBgn0001112 (score: 0.153)
  • FBgn0030588 (score: 0.149)
  • FBgn0030589 (score: 0.131)
  • FBgn0030587 (score: 0.108)
  • FBgn0030586 (score: 0.099)
  • FBgn0030594 (score: 0.061)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21838-PA (score: 1.000; bootstrap: 97%)
  • GA21849-PA (score: 0.494)
  • GA21847-PA (score: 0.396)
  • GA19386-PA (score: 0.256)
  • GA11607-PA (score: 0.208)
  • GA11047-PA (score: 0.198)
  • GA21852-PA (score: 0.174)
  • GA21850-PA (score: 0.162)
  • GA11686-PA (score: 0.160)
  • GA21853-PA (score: 0.136)
  • GA21846-PA (score: 0.079)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000008595 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000319851 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000025315 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000015674 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1860776 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6EPQ2 (score: 1.000; bootstrap: 79%)
  • Q6K4D7 (score: 1.000; bootstrap: 80%)
  • Q6Z290 (score: 0.731)
  • Q7XTZ0 (score: 0.636)
  • Q8H094 (score: 0.507)
  • Q8H052 (score: 0.504)
  • Q9M4V5 (score: 0.494)
  • Q67W87 (score: 0.263)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000025961 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000021407 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000172206 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00022584001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000001316 (score: 1.000; bootstrap: 50%)

From Inparanoid:20070104

E. coli O157

BETA

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00732


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Notes

Links

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Name URL Comments
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References

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Categories

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