bamA:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Gene Name
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[[yaeT:Gene|''yaeT]]'' (synonyms: ''ECK0176, b0177, JW0172, up05, ecfK, yzzN, yzzY, omp85(N.m.), bamA'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoGene'/>
[[yaeT:Gene|''yaeT]]'' (synonyms: ''ECK0176, b0177, JW0172, up05, ecfK, yzzN, yzzY, omp85(N.m.), bamA'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoGene'/>
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Product(s)  
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[[yaeT:Gene_Product(s)|YaeT product]]<ref name='LIB:Riley_2006'/>: conserved protein product, B0177 product, YzzN product, YzzY product, EcfK product; BamA product <ref name='LIB:EcoGene'/>
[[yaeT:Gene_Product(s)|YaeT product]]<ref name='LIB:Riley_2006'/>: conserved protein product, B0177 product, YzzN product, YzzY product, EcfK product; BamA product <ref name='LIB:EcoGene'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Description
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YaeT<ref name='LIB:EcoCyc10.6'/> YaeT-component of outer membrane protein assembly complex<ref name='LIB:EcoCyc11.1'/>  
YaeT<ref name='LIB:EcoCyc10.6'/> YaeT-component of outer membrane protein assembly complex<ref name='LIB:EcoCyc11.1'/>  


Component of [[:Category:Complex:Outer Membrane Protein Assembly Complex|Outer Membrane Protein Assembly Complex]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:Outer Membrane Protein Assembly Complex|Outer Membrane Protein Assembly Complex]]<ref name='LIB:EcoCyc11.1'/>
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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essential gene <ref name=PMID:15851030/>,<ref name=PMID:15951436/>,<ref name=PMID:16102012/>
essential gene <ref name=PMID:15851030/>,<ref name=PMID:15951436/>,<ref name=PMID:16102012/>
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE|yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE]]<ref name='LIB:EcoCyc10.6'/>, ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, [[:Category:Txn_unit:yaeT|yaeT]]<ref name='LIB:EcoCyc10.6'/>, ecfK  
transcription unit(s): [[:Category:Txn_unit:yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE|yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE]]<ref name='LIB:EcoCyc10.6'/>, ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, [[:Category:Txn_unit:yaeT|yaeT]]<ref name='LIB:EcoCyc10.6'/>, ecfK
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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==References==
==References==
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Revision as of 21:09, 21 January 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Gene Name

yaeT (synonyms: ECK0176, b0177, JW0172, up05, ecfK, yzzN, yzzY, omp85(N.m.), bamA)[1][2][3]

Product(s)

YaeT product[1]: conserved protein product, B0177 product, YzzN product, YzzY product, EcfK product; BamA product [3]

Description

YaeT[2] YaeT-component of outer membrane protein assembly complex[4]

Component of Outer Membrane Protein Assembly Complex[4]

Knock-Out Phenotype

essential gene [5],[6],[7]

Regulation/Expression

transcription unit(s): yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE[2], ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, yaeT[2], ecfK

Regulation/Activity


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See Help:Quickview for help with entering information in the Quickview table.

Notes

A consensus has been reached for renaming the genes that encode components of the outer membrane β-barrel assembly machine, (formerly known as the YaeT complex of E. coli or the Omp85 complex of N. meningitidis). The new designation for this multi-component structure is the Bam complex (for beta-barrel assembly machine).

The Bam complex in E. coli consists of BamA (YaeT), BamB (YfgL), BamC (NlpB), BamD (YfiO), and BamE (SmpA). Letters have been assigned on the basis of molecular weight, from highest to lowest [3].

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References

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  1. ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  4. ↑ 4.0 4.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ Wu, T et al. (2005) Identification of a multicomponent complex required for outer membrane biogenesis in Escherichia coli. Cell 121 235-45 PubMed
  6. ↑ Doerrler, WT & Raetz, CR (2005) Loss of outer membrane proteins without inhibition of lipid export in an Escherichia coli YaeT mutant. J. Biol. Chem. 280 27679-87 PubMed
  7. ↑ Werner, J & Misra, R (2005) YaeT (Omp85) affects the assembly of lipid-dependent and lipid-independent outer membrane proteins of Escherichia coli. Mol. Microbiol. 57 1450-9 PubMed
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