Protein Feature Ontology: Difference between revisions
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==About {{PAGENAME}} {{HelpIcon|Help:Databases}}== | ==About {{PAGENAME}} {{HelpIcon|Help:Databases}}== | ||
Snipped from [http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc] | Snipped from [http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc] | ||
The Protein Feature Ontology <ref name ='PMID:18936051'> has been developed to provide a structured controlled vocabulary for features | The Protein Feature Ontology <ref name ='PMID:18936051'/> has been developed to provide a structured controlled vocabulary for features | ||
a protein sequence or structure and comprises ~100 positional terms, now integrated into the Sequence Ontology (SO) and 40 | on a protein sequence or structure and comprises ~100 positional terms, now integrated into the Sequence Ontology (SO) and 40 | ||
non-positional terms which describe features relating to the whole-protein sequence. In addition, post-translational modifications are | non-positional terms which describe features relating to the whole-protein sequence. In addition, post-translational modifications are | ||
described by using a pre-existing ontology, the Protein Modification Ontology (MOD). | described by using a pre-existing ontology, the Protein Modification Ontology (MOD). | ||
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About Protein Feature Ontology
Snipped from http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc
The Protein Feature Ontology [1] has been developed to provide a structured controlled vocabulary for features on a protein sequence or structure and comprises ~100 positional terms, now integrated into the Sequence Ontology (SO) and 40 non-positional terms which describe features relating to the whole-protein sequence. In addition, post-translational modifications are described by using a pre-existing ontology, the Protein Modification Ontology (MOD).
Protein Feature Ontology is available at http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS
Content
Using Protein Feature Ontology
Browsing
Searching
Usage examples
Add links to additional pages describing success stories here.
Technology
Web Services/API
Discussion
References
External Links
Protein Feature Ontology URL:http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS