PMID:6370995: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
Edited by wikibot
D-struck (talk | contribs)
Table edited by D-struck via TableEdit
Line 21: Line 21:
<!--
<!--
******************************************************************************************
******************************************************************************************
*
*  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='220367'
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" 
|- {{table heading style}}
|- {{table heading style}}
!Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-
|
LpxB
|
 
|
[[Category:GO:0008915_!_lipid-A-disaccharide_synthase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0008915_!_lipid-A-disaccharide_synthase_activity GO:0008915]
|
lipid-A-disaccharide synthase activity
|
IDA: Inferred from Direct Assay
|
 
|
F
|
The conversion of UDP-2,3diacylglucosamine and [32P]2,3diacylglucosamine-1-phosphate into [32P]2,3-diacylglucosamine-(beta-1,6)2,3-diacylglucosamine-1-phosphate (lipid A disaccharide or tetraacyldisaccharide-1-phosphate) is monitored by thin layer chromatography and scintillation counting (Fig. 3).  Product formation can also be followed using a differential extraction procedure (Fig. 4) obviating the need for the chromatographic step.
|
complete
|-
|
LpxB
|
 
|
[[Category:GO:0009245_!_lipid_A_biosynthetic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0009245_!_lipid_A_biosynthetic_process GO:0009245]
|
lipid A biosynthetic process
|
IMP: Inferred from Mutant Phenotype
|
 
|
P
|
Extracts prepared from a strain with the pgsB1 (psgB has been renamed lpxB) mutation are markedly deficient in their ability to synthesize the lipid A disaccharide from its precursors (Fig. 9).
|
complete
 
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.Y46c32c82f008a&page=0&pagename={{FULLPAGENAMEE}} edit table] || || || || || || || ||
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.Y46c32c82f008a&page=112116&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table] || || || || || || || ||
|}
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.0.Y46c32c82f008a-->
<!--box uid=63ce1649aab8b3180235b0af7618f667.0.Y46c32c82f008a-->

Revision as of 16:49, 27 October 2008

Ray, BL, Painter, G and Raetz, CR (1984) The biosynthesis of gram-negative endotoxin. Formation of lipid A disaccharides from monosaccharide precursors in extracts of Escherichia coli.J. Biol. Chem. 259:4852-9

Abstract We have discovered an enzyme in the cytosol of Escherichia coli that generates lipid A disaccharides from monosaccharide precursors by the following route: 2,3-diacyl-GlcN-1-P + UDP-2,3-diacyl-GlcN---- 2,3-diacyl-GlcN (beta, 1----6) 2,3-diacyl-GlcN-1-P + UDP. Previous studies from our laboratory have documented the presence in vivo of the precursors 2,3-diacylglucosamine 1-phosphate (2,3-diacyl-GlcN-1-P) (lipid X of E. coli) and UDP-2,3-diacylglucosamine (UDP-2,3-diacyl-GlcN) (Bulawa, C.E., and Raetz, C.R.H.J. Biol. Chem. 259, 4846-4851). Both substrates are novel glucosamine-derived phospholipids, acylated with beta-hydroxymyristoyl moieties, and they accumulate in E. coli mutants defective in the pgsB gene. Synthetic ADP-, GDP-, and CDP-2,3-diacylglucosamines are inefficient substrates compared to the naturally occurring UDP derivative. The free-acid form of the tetraacyldisaccharide 1-phosphate product (C68H129N2O20P) that is generated in vitro has Mr = 1325.74 as judged by fast atom bombardment mass spectrometry. Mild acid hydrolysis (0.1 M HCl for 30 min at 100 degrees C) liberates greater than 95% of the phosphate moiety as Pi. Detailed analysis by 1H and 13C NMR spectroscopy confirms the presence of a phosphate residue at position 1 of the disaccharide, an alpha-anomeric configuration at the reducing end, and a beta, 1----6 linkage between the two glucosamines. Importantly the disaccharide 1-phosphate synthase is missing in extracts of E. coli strains harboring the pgsB1 mutation, consistent with the massive accumulation of 2,3-diacyl-GlcN-1-P and UDP-2,3-diacyl-GlcN in vivo. The enzymatic reaction reported here represents a major biosynthetic route for the formation of lipid A disaccharides in E. coli and other Gram-negative bacteria. An in vitro system for the biosynthesis of lipid A disaccharides has not been described previously.
Links PubMed

Significance

You can help EcoliWiki by summarizing why this paper is useful

Useful Materials and Methods

You can help Ecoliwiki by describing the useful materials (strains, plasmids, antibodies, etc) described in this paper.

Annotations

Gene product Qualifier GO ID GO term name Evidence Code with/from Aspect Notes Status

LpxB

GO:0008915

lipid-A-disaccharide synthase activity

IDA: Inferred from Direct Assay

F

The conversion of UDP-2,3diacylglucosamine and [32P]2,3diacylglucosamine-1-phosphate into [32P]2,3-diacylglucosamine-(beta-1,6)2,3-diacylglucosamine-1-phosphate (lipid A disaccharide or tetraacyldisaccharide-1-phosphate) is monitored by thin layer chromatography and scintillation counting (Fig. 3). Product formation can also be followed using a differential extraction procedure (Fig. 4) obviating the need for the chromatographic step.

complete

LpxB

GO:0009245

lipid A biosynthetic process

IMP: Inferred from Mutant Phenotype

P

Extracts prepared from a strain with the pgsB1 (psgB has been renamed lpxB) mutation are markedly deficient in their ability to synthesize the lipid A disaccharide from its precursors (Fig. 9).

complete

edit table

EcoliWiki Links

Add links to pages that link here (e.g. gene, product, method pages)

References

See Help:References for how to manage references in EcoliWiki.