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*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=NP_415201&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_415201&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]


Revision as of 06:55, 14 November 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000018510 (score: 1.000; bootstrap: 86%)
  • ENSANGP00000011965 (score: 0.119)
  • ENSANGP00000019927 (score: 0.097)
  • ENSANGP00000024232 (score: 0.097)
  • ENSANGP00000011809 (score: 0.051)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000003008 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G36790 (score: 1.000; bootstrap: 100%)
  • AT5G36700 (score: 1.000; bootstrap: 100%)
  • AT5G47760 (score: 0.487)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000013127 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00030926 (score: 1.000; bootstrap: 76%)
  • WBGene00030927 (score: 0.884)
  • WBGene00029103 (score: 0.166)
  • WBGene00039013 (score: 0.109)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00016892 (score: 1.000; bootstrap: 77%)
  • WBGene00018424 (score: 1.000; bootstrap: 76%)
  • WBGene00019604 (score: 1.000; bootstrap: 77%)
  • WBGene00019301 (score: 0.196)
  • WBGene00016664 (score: 0.171)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000025912 (score: 1.000; bootstrap: 56%)
  • ENSCAFP00000018755 (score: 0.226)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000000285 (score: 1.000; bootstrap: 59%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-6240 (score: 1.000; bootstrap: 79%)
  • ZDB-CDNA-040425-1460 (score: 1.000; bootstrap: 76%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0186160 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0036760 (score: 1.000; bootstrap: 83%)
  • FBgn0052487 (score: 0.240)
  • FBgn0052488 (score: 0.240)
  • FBgn0034713 (score: 0.179)
  • FBgn0036759 (score: 0.159)
  • FBgn0030347 (score: 0.081)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA16942-PA (score: 1.000; bootstrap: 87%)
  • GA16941-PA (score: 0.244)
  • GA18976-PA (score: 0.228)
  • GA18982-PA (score: 0.098)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000002892 (score: 1.000; bootstrap: 76%)
  • ENSGALP00000022802 (score: 0.233)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000330918 (score: 1.000; bootstrap: 78%)
  • ENSP00000215904 (score: 0.292)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000025276 (score: 1.000; bootstrap: 81%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000019860 (score: 1.000; bootstrap: 94%)
  • ENSMODP00000000548 (score: 0.276)

From Inparanoid:20070104

Mus musculus

  • MGI:1914328 (score: 1.000; bootstrap: 81%)
  • MGI:1919282 (score: 0.279)

From Inparanoid:20070104

Oryza gramene

  • Q6EP66 (score: 1.000; bootstrap: 100%)
  • Q7X7H3 (score: 0.601)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000024706 (score: 1.000; bootstrap: 70%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000012720 (score: 1.000; bootstrap: 88%)
  • ENSRNOP00000050300 (score: 0.279)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDL236W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC15D45 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000141793 (score: 1.000; bootstrap: 76%)
  • NEWSINFRUP00000128523 (score: 0.311)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00024192001 (score: 1.000; bootstrap: 87%)
  • GSTENP00030960001 (score: 0.287)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000035103 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

E. coli O157

NAGD

From ECOO157CYC

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Notes

Families

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Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00702

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Notes

Links

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Name URL Comments
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References

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