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*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=NP_415320&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_415320&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]


Revision as of 06:50, 14 November 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000002680 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000028108 (score: 0.092)
  • ENSBTAP00000016008 (score: 0.082)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000221481 (score: 1.000; bootstrap: 100%)
  • ENSP00000259008 (score: 0.107)
  • ENSP00000347362 (score: 0.085)
  • ENSP00000228264 (score: 0.079)
  • ENSP00000339557 (score: 0.070)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000021212 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000022909 (score: 0.082)

From Inparanoid:20070104

Mus musculus

  • MGI:95413 (score: 1.000; bootstrap: 100%)
  • MGI:2139369 (score: 0.109)
  • MGI:2442836 (score: 0.107)
  • MGI:2443590 (score: 0.088)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000019135 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000024247 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000036908 (score: 0.105)
  • ENSRNOP00000036941 (score: 0.094)
  • ENSRNOP00000016588 (score: 0.061)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YER171W (score: 1.000; bootstrap: 100%)
  • YPL008W (score: 0.069)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000180374 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000139789 (score: 0.235)
  • NEWSINFRUP00000129998 (score: 0.167)
  • NEWSINFRUP00000150294 (score: 0.086)

From Inparanoid:20070104

Shigella flexneri

DING

From SHIGELLACYC

E. coli O157

Z1020

From ECOO157CYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

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Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000002680 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000028108 (score: 0.092)
  • ENSBTAP00000016008 (score: 0.082)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000221481 (score: 1.000; bootstrap: 100%)
  • ENSP00000259008 (score: 0.107)
  • ENSP00000347362 (score: 0.085)
  • ENSP00000228264 (score: 0.079)
  • ENSP00000339557 (score: 0.070)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000021212 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000022909 (score: 0.082)

From Inparanoid:20070104

Mus musculus

  • MGI:95413 (score: 1.000; bootstrap: 100%)
  • MGI:2139369 (score: 0.109)
  • MGI:2442836 (score: 0.107)
  • MGI:2443590 (score: 0.088)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000019135 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000024247 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000036908 (score: 0.105)
  • ENSRNOP00000036941 (score: 0.094)
  • ENSRNOP00000016588 (score: 0.061)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YER171W (score: 1.000; bootstrap: 100%)
  • YPL008W (score: 0.069)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000180374 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000139789 (score: 0.235)
  • NEWSINFRUP00000129998 (score: 0.167)
  • NEWSINFRUP00000150294 (score: 0.086)

From Inparanoid:20070104

Shigella flexneri

DING

From SHIGELLACYC

E. coli O157

Z1020

From ECOO157CYC

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.



Categories

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