Category:Complex:EcoKI restriction-modification system: Difference between revisions

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==About==
{{Complex placeholder}}
'''Description''' (originally from EcoCyc<ref name='LIB:EcoCyc11.1'/>) <I>Eco</I>KI restriction-modification system
 
'''Comments''' (originally from EcoCyc<ref name='LIB:EcoCyc11.1'/>) <I>Eco</I>KI is the type IA restriction-modification enzyme complex responsible
for identifying and restricting unmethylated, foreign DNA and for modifying native,
hemimethylated DNA by methylation for self-identification. The three proteins
which make up <I>Eco</I>KI-HsdR, HsdM, and HsdS-are all required for
restriction. There is a complex that can form-HsdM2HsdS1-with only
methyltransferase activity. HsdM and HsdS are required for methylation.
HsdM contains a methyltransferase active site and a site for cofactor binding.
The cofactor <I>S</I>-adenosylmethionine (AdoMet) acts as the methyl donor
for modification. Hemimethylated DNA is preferred over unmethylated DNA as
substrate for modification. Interaction of HsdS with DNA requires HsdM. HsdS
contains two target recognition domains which recognize the sequence 5'AAC(N6)GTGC.
One recognizes the AAC sequence, while the other recognizes the GTGC sequence.
HsdR couples DNA translocation to ATP hydrolysis and contains the catalytic
site for restriction of the DNA. When the <I>Eco</I>KI binds its target sequence,
it makes another contact with the DNA which begins translocation of the DNA
while still remaining bound to the target sequence, creating loops. Restriction
occurs when translocation becomes stalled because enzymes run into each other,
when DNA becomes too supercoiled, when the loop of DNA between two
dimerized enzymes becomes taut, and when the enzyme becomes blocked,
such as at Holliday junctions. Endonucleolytic activity requires
Mg<sup>2+</sup>, ATP, and AdoMet <ref name='PMID:10839821'/><ref name='PMID:14654681'/>.
 
 
==References==
<references/>
[[Category:Complexes]]
[[Category:E. coli complexes]]

Revision as of 15:38, 3 August 2007

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