SGD: Difference between revisions
| Line 43: | Line 43: | ||
==Browsing== | ==Browsing== | ||
==Searching== | ==Searching== | ||
You may search by: | |||
:* gene name, product, or description | |||
:* name of protein or protein complex | |||
:* GO terms | |||
:* GO IDs | |||
:* colleagues or authors | |||
:* biochemical pathways | |||
:* Pubmed ID | |||
Sometimes you may need to investigate genes or proteins without knowing their names. You can search for a class of similarly named genes using the wildcard character (e.g., searching for 'pet*' brings up PET54, PET122, PET494...). Or, you can search with the name of a protein (e.g., profilin) or protein complex (e.g., cytochrome c oxidase), or a Gene Ontology term (see next section) to bring up lists of the Locus Pages where this text occurs. Each gene name in the hit list resulting from the search is hyperlinked to the corresponding Locus Page. | |||
==Usage examples== | ==Usage examples== | ||
''Add links to additional pages describing success stories here.'' | ''Add links to additional pages describing success stories here.'' | ||
Revision as of 18:43, 29 August 2006
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| SGD | |
| Who: | Mike Cherry, Stanford Univ. |
| What: | Comprehensive data resource for S. cerevisiae (baker's yeast) |
| Where: | SGD |
| Updates | |
| Upcoming events | |
| Web Services | |
About SGD
SGD houses genetic and biological info about S. cerevisiae. It is the main genome database for Sacchromyces.
Content
Sequences of yeast genes and proteins
Descriptions and classifications of:
- biological roles
- molecular functions
- subcellular localizations
Links to:
- literature information
- functional genomics datasets
- tools for analysis and comparison of sequences
Using SGD
Browsing
Searching
You may search by:
- gene name, product, or description
- name of protein or protein complex
- GO terms
- GO IDs
- colleagues or authors
- biochemical pathways
- Pubmed ID
Sometimes you may need to investigate genes or proteins without knowing their names. You can search for a class of similarly named genes using the wildcard character (e.g., searching for 'pet*' brings up PET54, PET122, PET494...). Or, you can search with the name of a protein (e.g., profilin) or protein complex (e.g., cytochrome c oxidase), or a Gene Ontology term (see next section) to bring up lists of the Locus Pages where this text occurs. Each gene name in the hit list resulting from the search is hyperlinked to the corresponding Locus Page.
Usage examples
Add links to additional pages describing success stories here.
Technology
Web Services/API
Discussion
Trackbacks
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