ybjS:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
imported>WikiEntryBot
Automated import of articles
 
imported>WikiEntryBot
Automated import of articles
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|ybjS}}{{Tab|Gene|ybjS}}{{Tab|Gene Product(s)|ybjS}}{{Tab|Expression|ybjS}}{{Tab On|Evolution|ybjS}}{{Tab|On One Page|ybjS}}{{TabsBottom}}
{{Tab|Quickview|ybjS}}{{Tab|Gene|ybjS}}{{Tab|Gene Product(s)|ybjS}}{{Tab|Expression|ybjS}}{{Tab On|Evolution|ybjS}}{{Tab|On One Page|ybjS}}{{TabsBottom}}
Line 12: Line 21:
</noinclude>
</noinclude>
==Homologs in Other Organisms==
==Homologs in Other Organisms==
<!--box uid=421aa90e079fa326b6494f812ad13e79..V46a072453be59-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45705.O46abb0885113b-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='87731'  
{|class = 'sortable' {{Prettytable}} id='208403'  
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!Organism!!Homologs (Statistics)!!Comments
Line 184: Line 194:
From SHIGELLACYC  
From SHIGELLACYC  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..V46a072453be59&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.45705.O46abb0885113b&page=45705&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..V46a072453be59-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45705.O46abb0885113b-->
{{Evolution_homologs_table_help}}
{{Evolution_homologs_table_help}}


Line 200: Line 210:


==Families==
==Families==
<!--box uid=421aa90e079fa326b6494f812ad13e79..V46a072453be59-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45705.O46abb0885113b-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='87731'  
{|class = 'sortable' {{Prettytable}} id='208403'  
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!Organism!!Homologs (Statistics)!!Comments
Line 379: Line 390:
From ECOO157CYC  
From ECOO157CYC  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..V46a072453be59&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.45705.O46abb0885113b&page=45705&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..V46a072453be59-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45705.O46abb0885113b-->
{{Evolution_families_table_help}}
{{Evolution_families_table_help}}
<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
Line 388: Line 399:


==Links==
==Links==
{{Evolution_links_default}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45705.A46a7fdcfb7f38-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='109729'
|- {{table_heading_style}}
!Name!!URL!!Comments
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.45705.A46a7fdcfb7f38&page=45705&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45705.A46a7fdcfb7f38-->
{{Links_help}}
 
==References==
==References==
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references/>

Revision as of 21:09, 28 July 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT1G47290 (score: 1.000; bootstrap: 92%)
  • AT2G26260 (score: 0.772)
  • AT2G43420 (score: 0.245)
  • AT2G33630 (score: 0.091)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000012167 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000024475 (score: 0.127)
  • ENSBTAP00000017350 (score: 0.071)
  • ENSBTAP00000003028 (score: 0.059)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00022498 (score: 1.000; bootstrap: 100%)
  • WBGene00022616 (score: 0.350)
  • WBGene00012394 (score: 0.182)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000028277 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000029600 (score: 0.111)
  • ENSCAFP00000024667 (score: 0.057)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050417-163 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-164 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-051120-63 (score: 0.142)
  • ZDB-CDNA-050703-12 (score: 0.072)
  • ZDB-GENE-030828-2 (score: 0.072)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0205620 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000031700 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000008742 (score: 0.149)
  • ENSGALP00000011268 (score: 0.083)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000276346 (score: 1.000; bootstrap: 100%)
  • ENSP00000332407 (score: 0.120)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000017308 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000026808 (score: 0.110)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007345 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000018953 (score: 0.168)
  • ENSMODP00000009558 (score: 0.115)
  • ENSMODP00000002133 (score: 0.052)
  • ENSMODP00000006650 (score: 0.050)

From Inparanoid:20070104

Mus musculus

  • MGI:1099438 (score: 1.000; bootstrap: 100%)
  • MGI:1921282 (score: 0.125)
  • MGI:3645276 (score: 0.083)
  • MGI:2141879 (score: 0.077)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000014331 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000002009 (score: 0.085)
  • ENSPTRP00000013710 (score: 0.080)
  • ENSPTRP00000002008 (score: 0.080)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000022985 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000037042 (score: 0.061)
  • ENSRNOP00000026306 (score: 0.051)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YGL001C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC3F62c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000138191 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000155379 (score: 0.142)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00017071001 (score: 1.000; bootstrap: 100%)
  • GSTENP00008813001 (score: 0.145)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000039937 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000007732 (score: 0.137)

From Inparanoid:20070104

Shigella flexneri

S0864

From SHIGELLACYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

[back to top]


Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT1G47290 (score: 1.000; bootstrap: 92%)
  • AT2G26260 (score: 0.772)
  • AT2G43420 (score: 0.245)
  • AT2G33630 (score: 0.091)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000012167 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000024475 (score: 0.127)
  • ENSBTAP00000017350 (score: 0.071)
  • ENSBTAP00000003028 (score: 0.059)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00022498 (score: 1.000; bootstrap: 100%)
  • WBGene00022616 (score: 0.350)
  • WBGene00012394 (score: 0.182)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000028277 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000029600 (score: 0.111)
  • ENSCAFP00000024667 (score: 0.057)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050417-163 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-164 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-051120-63 (score: 0.142)
  • ZDB-CDNA-050703-12 (score: 0.072)
  • ZDB-GENE-030828-2 (score: 0.072)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0205620 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000031700 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000008742 (score: 0.149)
  • ENSGALP00000011268 (score: 0.083)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000276346 (score: 1.000; bootstrap: 100%)
  • ENSP00000332407 (score: 0.120)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000017308 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000026808 (score: 0.110)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007345 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000018953 (score: 0.168)
  • ENSMODP00000009558 (score: 0.115)
  • ENSMODP00000002133 (score: 0.052)
  • ENSMODP00000006650 (score: 0.050)

From Inparanoid:20070104

Mus musculus

  • MGI:1099438 (score: 1.000; bootstrap: 100%)
  • MGI:1921282 (score: 0.125)
  • MGI:3645276 (score: 0.083)
  • MGI:2141879 (score: 0.077)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000014331 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000002009 (score: 0.085)
  • ENSPTRP00000013710 (score: 0.080)
  • ENSPTRP00000002008 (score: 0.080)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000022985 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000037042 (score: 0.061)
  • ENSRNOP00000026306 (score: 0.051)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YGL001C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC3F62c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000138191 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000155379 (score: 0.142)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00017071001 (score: 1.000; bootstrap: 100%)
  • GSTENP00008813001 (score: 0.145)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000039937 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000007732 (score: 0.137)

From Inparanoid:20070104

Shigella flexneri

S0864

From SHIGELLACYC

E. coli O157

Z1102

From ECOO157CYC

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.