amtB:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
imported>WikiEntryBot
Automated import of articles
 
imported>WikiEntryBot
Automated import of articles
Line 1: Line 1:
<!--PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE, YOU'RE PROBABLY IN THE WRONG PLACE-->
<!--
***************************************************************************************************************************************************
*
*
*              PLEASE EDIT FROM THE SECTION OR TABLE EDIT LINKS...IF YOU SEE THIS MESSAGE,
*                            YOU'RE PROBABLY IN THE WRONG PLACE
*
*
***************************************************************************************************************************************************
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|amtB}}{{Tab|Gene|amtB}}{{Tab|Gene Product(s)|amtB}}{{Tab|Expression|amtB}}{{Tab On|Evolution|amtB}}{{Tab|On One Page|amtB}}{{TabsBottom}}
{{Tab|Quickview|amtB}}{{Tab|Gene|amtB}}{{Tab|Gene Product(s)|amtB}}{{Tab|Expression|amtB}}{{Tab On|Evolution|amtB}}{{Tab|On One Page|amtB}}{{TabsBottom}}
Line 12: Line 21:
</noinclude>
</noinclude>
==Homologs in Other Organisms==
==Homologs in Other Organisms==
<!--box uid=421aa90e079fa326b6494f812ad13e79..Q46a06d3c2ea4a-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44877.N46aba25fbf863-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='87026'  
{|class = 'sortable' {{Prettytable}} id='207697'  
|- {{table heading style}}
|- {{table heading style}}
!Organism!!Homologs (Statistics)!!Comments
!Organism!!Homologs (Statistics)!!Comments
Line 255: Line 265:
From SHIGELLACYC  
From SHIGELLACYC  
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..Q46a06d3c2ea4a&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.44877.N46aba25fbf863&page=44877&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..Q46a06d3c2ea4a-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.44877.N46aba25fbf863-->
{{Evolution_homologs_table_help}}
{{Evolution_homologs_table_help}}


Line 271: Line 281:


==Families==
==Families==
<!--box uid=421aa90e079fa326b6494f812ad13e79..J46a06d4bd928e-->
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44877.B46aba2899c9c7-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='87027'  
{|class = 'sortable' {{Prettytable}} id='207698'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Database!!Accession!!Notes
!Database!!Accession!!Notes
Line 284: Line 295:
   
   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79..J46a06d4bd928e&page=&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.44877.B46aba2899c9c7&page=44877&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79..J46a06d4bd928e-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.44877.B46aba2899c9c7-->
{{Evolution_families_table_help}}
{{Evolution_families_table_help}}
<protect><!--Families_notes--></protect>
<protect><!--Families_notes--></protect>
Line 293: Line 304:


==Links==
==Links==
{{Evolution_links_default}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44877.Y46a7f162a165c-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ***  -->
{|class = 'sortable' {{Prettytable}} id='108664'
|- {{table_heading_style}}
!Name!!URL!!Comments
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.44877.Y46a7f162a165c&page=44877&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.44877.Y46a7f162a165c-->
{{Links_help}}
 
==References==
==References==
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references/>

Revision as of 20:09, 28 July 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014231 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000006873 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G38290 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000015012 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000007196 (score: 0.383)
  • ENSBTAP00000016227 (score: 0.319)
  • ENSBTAP00000001711 (score: 0.275)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00034965 (score: 1.000; bootstrap: 91%)
  • WBGene00034967 (score: 1.000; bootstrap: 91%)
  • WBGene00034968 (score: 0.644)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00000136 (score: 1.000; bootstrap: 93%)
  • WBGene00000133 (score: 0.616)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000003128 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000017563 (score: 0.505)
  • ENSCAFP00000024727 (score: 0.420)
  • ENSCAFP00000018961 (score: 0.250)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000012012 (score: 1.000; bootstrap: 97%)
  • ENSCINP00000008302 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-8229 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-030131-9542 (score: 0.549)
  • ZDB-GENE-040426-2595 (score: 0.485)
  • ZDB-GENE-000427-1 (score: 0.397)
  • ZDB-CDNA-040425-1552 (score: 0.348)
  • ZDB-CDNA-040425-3542 (score: 0.330)
  • ZDB-GENE-051213-1 (score: 0.289)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0185017 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0038309 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19641-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000268122 (score: 1.000; bootstrap: 100%)
  • ENSP00000274818 (score: 1.000; bootstrap: 100%)
  • ENSP00000255013 (score: 0.487)
  • ENSP00000331871 (score: 0.240)
  • ENSP00000294413 (score: 0.236)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000029855 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000023615 (score: 0.483)
  • ENSMMUP00000015845 (score: 0.381)
  • ENSMMUP00000014601 (score: 0.144)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000023518 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000024393 (score: 0.478)
  • ENSMODP00000021054 (score: 0.463)
  • ENSMODP00000017480 (score: 0.282)

From Inparanoid:20070104

Mus musculus

  • MGI:1888517 (score: 1.000; bootstrap: 100%)
  • MGI:1927379 (score: 0.463)
  • MGI:1202713 (score: 0.376)
  • MGI:1202882 (score: 0.138)

From Inparanoid:20070104

Oryza gramene

  • Q6T8L6 (score: 1.000; bootstrap: 92%)
  • Q851M9 (score: 0.844)
  • Q84KJ6 (score: 0.713)
  • Q69T29 (score: 0.660)
  • Q84KJ7 (score: 0.575)
  • Q84K95 (score: 0.575)
  • Q8S233 (score: 0.575)
  • Q8S230 (score: 0.565)
  • Q8W300 (score: 0.089)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000012708 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000002466 (score: 0.463)
  • ENSPTRP00000031201 (score: 0.437)
  • ENSPTRP00000043652 (score: 0.087)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000021109 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000026396 (score: 0.466)
  • ENSRNOP00000040256 (score: 0.358)
  • ENSRNOP00000048811 (score: 0.358)
  • ENSRNOP00000023187 (score: 0.139)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNL142W (score: 1.000; bootstrap: 100%)
  • YPR138C (score: 1.000; bootstrap: 100%)
  • YGR121C (score: 0.724)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCPB1C111 (score: 1.000; bootstrap: 100%)
  • SPAC6644 (score: 0.278)
  • SPAC2E1P32c (score: 0.116)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000177155 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000162837 (score: 0.436)
  • NEWSINFRUP00000161244 (score: 0.420)
  • NEWSINFRUP00000144294 (score: 0.392)
  • NEWSINFRUP00000164777 (score: 0.346)
  • NEWSINFRUP00000136949 (score: 0.083)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00006962001 (score: 1.000; bootstrap: 100%)
  • GSTENP00024318001 (score: 0.551)
  • GSTENP00018505001 (score: 0.505)
  • GSTENP00017669001 (score: 0.487)
  • GSTENP00022829001 (score: 0.467)
  • GSTENP00031388001 (score: 0.158)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000038537 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000043046 (score: 0.475)
  • ENSXETP00000024372 (score: 0.324)
  • ENSXETP00000026333 (score: 0.277)
  • ENSXETP00000007964 (score: 0.220)

From Inparanoid:20070104

Shigella flexneri

AMTB

From SHIGELLACYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

[back to top]


Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00909

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.