Template:Gene: Difference between revisions

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<noinclude>{{TabsTop}}  
<noinclude>{{TabsTop}}  
{{Tab|Quickview|{{{1}}}}}{{Tab On|Gene|{{{1}}}}}{{Tab|Gene Product(s)|{{{1}}}}}{{Tab|Expression|{{{1}}}}}{{Tab|Evolution|{{{1}}}}}{{Tab|On One Page|{{{1}}}}}{{TabsBottom}}
{{Tab|Quickview|{{{1}}}}}{{Tab On|Gene|{{{1}}}}}{{Tab|Gene Product(s)|{{{1}}}}}{{Tab|Expression|{{{1}}}}}{{Tab|Evolution|thrL}}{{Tab|On One Page|{{{1}}}}}{{TabsBottom}}
{| style="font-size:130%;"
{| style="font-size:130%;"
|-
|-
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|-
|-
|bgcolor ='#DDDDFF'|Standard name || {{{1}}}
|bgcolor ='#DDDDFF'|Standard name || <!--gn--><!--/gn-->
|-
|-
|bgcolor ='#DDDDFF'|Mnemonic || {{{2}}}
|bgcolor ='#DDDDFF'|Mnemonic || <!--pd--><!--/pd-->
|-
|-
|bgcolor ='#DDDDFF'|Synonyms || {{{3}}}
|bgcolor ='#DDDDFF'|Synonyms || <!--syn--><!--/syn-->
|-
|-
|bgcolor ='#DDDDFF'|Accessions||
|bgcolor ='#DDDDFF'|Accessions||
*bnum: {{{4}}}
*bnum:<!--bnum--><!--/bnum-->
*JW: {{{5}}}
*JW:<!--jwnum--><!--/jwnum-->
*ECK: {{{6}}}
*ECK:<!--eck--><!--/eck-->
*EcoCyc: {{{7}}}
*EcoCyc:<!--ecocyc--><!--/ecocyc-->
|-
|-
|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
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{|{{Prettytable}}
{|{{Prettytable}}
|-
|-
|bgcolor ='#DDDDFF'| Map location || {{{8}}}
|bgcolor ='#DDDDFF'| Map location ||<!--maploc--><!--/maploc-->
|-
|-
|bgcolor ='#DDDDFF'| Genome coordinates
|bgcolor ='#DDDDFF'| Genome coordinates
|
|
*In MG1655: {{{9}}} to {{{10}}}
*In MG1655: <!--mgleft--><!--/mgleft--> to <!--mgright--><!--/mgright-->
{{GBrowseFigureByCoord|{{{11}}}|{{{12}}}}}
{{GBrowseFigureByCoord|<!--mgleftext--><!--/mgleftext-->|<!--mgrightext--><!--/mgrightext-->}}
*In W3110:{{{13}}} to {{{14}}}
*In W3110:<!--wleft--><!--/wleft--> to <!--wright--><!--/wright-->
{{GBrowseFigureByCoord|{{{15}}}|{{{16}}}|ecoli_W3110|W3110}}
{{GBrowseFigureByCoord|<!--wleftext--><!--/wleftext-->|<!--wrightext--><!--/wrightext-->|ecoli_W3110|W3110}}
|-
|-
|bgcolor ='#DDDDFF'| Genome browsers
|bgcolor ='#DDDDFF'| Genome browsers
|
|
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&object={{{17}}}&chromosome=COLI-K12 EcoCyc] (MG1655)
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&object=<!--eg--><!--/eg-->&chromosome=COLI-K12 EcoCyc] (MG1655)
*[http://www.ecogene.org/geneinfo.php?eg_id={{{17}}}](W3110)
*[http://www.ecogene.org/geneinfo.php?eg_id=<!--eg--><!--/eg-->](W3110)
*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli/?q=MG1655:{{{9}}}..{{{10}}} Gbrowse](MG1655)
*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli/?q=MG1655:<!--mgleft--><!--/mgleft-->..<!--mgright--><!--/mgright--> Gbrowse](MG1655)
*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli_W3110/?q=W3110:{{{13}}}..{{{14}}} Gbrowse] (W3110)
*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli_W3110/?q=W3110:<!--wleft--><!--/wleft-->..<!--wright--><!--/wright--> Gbrowse] (W3110)
|-
|-
|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
Line 60: Line 60:


==DNA sequence and features==
==DNA sequence and features==
[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli/?plugin=FastaDumper&name=MG1655:{{{9}}}..{{{10}}}&plugin_action=Go FastA dump]
[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli/?plugin=FastaDumper&name=MG1655:<!--mgleft--><!--/mgleft-->..<!--mgright--><!--/mgright-->&plugin_action=Go FastA dump]




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===Clones===
===Clones===
*[http://ecoli.naist.jp/GB6/kohara_info.jsp?fword=101 Kohara phage]
*[http://ecoli.naist.jp/GB6/kohara_info.jsp?fword=101 Kohara phage]
*[http://ecoli.naist.jp/GB6/ex_archive.jsp?id={{{5}}} ASKA Clone]
*[http://ecoli.naist.jp/GB6/ex_archive.jsp?id=<!--jwnum--><!--/jwnum--> ASKA Clone]


===F's and Hfrs===
===F's and Hfrs===

Revision as of 16:52, 17 October 2006

[[{{{1}}}:Quickview|Quickview]]   Gene   [[{{{1}}}:Gene Product(s)|Gene Product(s)]]   [[{{{1}}}:Expression|Expression]]   Evolution   [[{{{1}}}:On One Page|On One Page]]    
Nomenclature | Location(s) | DNA sequence and features| Alleles and phenotypes | Genetic Resources | Accessions in other databases| References |


Nomenclature

Standard name
Mnemonic
Synonyms
Accessions
  • bnum:
  • JW:
  • ECK:
  • EcoCyc:
The contents of this table are automatically generated.

Please do not edit this section. Users should add or edit information below "Notes"

Notes

Location(s)

Map location
Genome coordinates
  • In MG1655: to

gbrowse_img.php?coord=..&genome=ecoli&name=MG1655&trackset=0&width=300&.png

  • In W3110: to

gbrowse_img.php?coord=..&genome=ecoli_W3110&name=W3110&trackset=0&width=300&.png

Genome browsers
The contents of this table are automatically generated.

Please do not edit this section. Users should add or edit information below "Notes"

Notes

DNA sequence and features

FastA dump


Features

Notes

Alleles and phenotypes

Allele nt Change aa Change Phenotype Reference CGSC ID
The contents of this table are automatically generated.

Please do not edit this section. Users should add or edit information below "Notes"

Notes

Genetic Resources

Linked markers

Clones

F's and Hfrs

Accessions in other databases

Database Accession
The contents of this table are automatically generated.

Please do not edit this section. Users should add or edit information below "Notes"

References


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