PMID:19082552: Difference between revisions

Revision as of 19:06, 1 September 2013

Citation	No author listed (2009) In silico identification of genes in bacteriophage DNA. Methods Mol. Biol. 502:57-89
Abstract	One of the most satisfying aspects of a genome sequencing project is the identification of the genes contained within it.These are of two types: those which encode tRNAs and those which produce proteins. After a general introduction on the properties of protein-encoding genes and the utility of the Basic Local Alignment Search Tool (BLASTX) to identify genes through homologs, a variety of tools are discussed by their creators. These include for genome annotation: GeneMark, Artemis, and BASys; and, for genome comparisons: Artemis Comparison Tool (ACT), Mauve, CoreGenes, and GeneOrder.
Links	PubMed Online version:10.1007/978-1-60327-565-1_6
Keywords	Bacteriophages/genetics; Computational Biology/methods; DNA, Viral/analysis; DNA, Viral/genetics; Software
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