yggX:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2957, b2962, JW2929''<ref name='LIB:Riley_2006'/>
''ECK2957, b2962, JW2929''<ref name='LIB:Riley_2006'/>, JW2929''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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protein that protects iron-sulfur proteins against oxidative damage<ref name='LIB:Riley_2006'/>, B2962<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YggX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''protein that protects iron-sulfur proteins against oxidative damage<ref name='LIB:Riley_2006'/>, B2962<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YggX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2957, JW2929, b2962''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=yggX&s=search PortEco search(yggX)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=yggX&loc=MG1655:3102115..3102390,W3110:3102749..3103024,DH10B:3197184..3197459,REL606:2989754..2990029,BW2952:2989263..2989538 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2989263&end=2989538&gene=yggX&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yggX+AND+escherichia+coli Pubmed(yggX)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yggX Textpresso(yggX)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yggX&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7532]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004093&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yggX&loc=MG1655%3A3102115..3102390,W3110%3A3102749..3103024,DH10B%3A3197184..3197459,REL606%3A2989754..2990029,BW2952%3A2989263..2989538]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2989263&end=2989538&gene=yggX&aa=msrtifctflqreaegqdfqlypgelgkriyneiskeawaqwqhkqtmlinekklnmmnaehrklleqemvnflfegkevhiegytpedkk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yggX+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yggX]]&nbsp;&nbsp;


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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yggX

Gene Synonym(s)

ECK2957, b2962, JW2929[1], JW2929

Product Desc.

protein that protects iron-sulfur proteins against oxidative damage[2][3]

Confers protection of iron-sulfur proteins against oxidative damage; paraquat resistance[4]

Product Synonyms(s)

protein that protects iron-sulfur proteins against oxidative damage[1], B2962[2][1], YggX[2][1] , ECK2957, JW2929, b2962

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): mutY-yggX-mltC[2], mutY-yggX[2], yggX-mltC[2], yggX[2], yggX-mltC-nupG[2], mutY-yggX-mltC-nupG[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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SoxRS regulon. Cys7 is essential for YggX function in Salmonella; Salmonella YggX is involved in Fe(II) trafficking, but does not bind iron. otherPDB (S. typhimurium): 1XS8.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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