pqqL:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1488, b1494, JW1489, pqqE, pqqM, yddC''<ref name='LIB:Riley_2006'/>
''ECK1488, b1494, JW1489, pqqE, pqqM, yddC''<ref name='LIB:Riley_2006'/>, yddC''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted peptidase<ref name='LIB:Riley_2006'/>, B1494<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PqqE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PqqM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YddC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PqqL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted peptidase<ref name='LIB:Riley_2006'/>, B1494<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PqqE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PqqM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YddC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PqqL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1488, JW1489, pqqE, pqqM, yddC, b1494''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=pqqL&s=search PortEco search(pqqL)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=pqqL&loc=MG1655:1573226..1570431,W3110:1576916..1574121,DH10B:1663821..1661026,REL606:1549153..1546358,BW2952:1462490..1465285 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1462490&end=1465285&gene=pqqL&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pqqL+AND+escherichia+coli Pubmed(pqqL)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pqqL Textpresso(pqqL)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pqqL&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11744]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001683&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pqqL&loc=MG1655%3A1573226..1570431,W3110%3A1576916..1574121,DH10B%3A1663821..1661026,REL606%3A1549153..1546358,BW2952%3A1462490..1465285]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1462490&end=1465285&gene=pqqL&aa=meiimrnlcflltlvatlllpgrliaaalpqdeklitgqldnglrymiyphahpkdqvnlwlqihtgslqeednelgvahfvehmmfngtktwpgnkvietfesmglrfgrdvnaytsydetvyqvslpttqkqnlqqvmaifsewsnaatfeklevdaergviteewrahqdakwrtsqarrpfllantrnldrepiglmdtvatvtpaqlrqfyqrwyqpnnmtfivvgdidskealalikdnlsklpankaaenrvwptkaenhlrfniindkenrvngialyyrlpmvqvndeqsfieqaewsmlvqlfnqrlqeriqsgelktisggtarsvkiapdyqslffrvnarddnmqdaanalmaelatidqhgfsaeelddvkstrltwlknavdqqaerdlrmltsrlassslnntpflspeetyqlskrlwqqitvqslaekwqqlrknqdafweqmvnnevaakkalspaailalekeyankklaayvfpgrnlsltvdadpqaeissketlaenltsltlsngarvilaksageeqklqiiavsnkgdlsfpaqqkslialankavsgsgvgelsssslkrwsaensvtmsskvsgmntllsvsartnnpepgfqlinqrithstindniwaslqnaqiqalktldqrpaekfaqqmyetryaddrtkllqenqiaqftaadalaadrqlfsspaditfvivgnvaedklvalitrylgsikhsdsplaagkpltratdnasvtvkeqnepvaqvsqwkrydsrtpvnlptrmaldafnvalakdlrvnireqasgaysvssrlsvdpqakdishllaftcqperhdelltlanevmvkrlakgiseqelneyqqnvqrsldiqqrsvqqlantivnsliqyddpaawteqeqllkqmtvenvntavkqylshpvntytgvllpk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pqqL+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pqqL]]&nbsp;&nbsp;


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Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pqqL

Gene Synonym(s)

ECK1488, b1494, JW1489, pqqE, pqqM, yddC[1], yddC

Product Desc.

putative zinc peptidase[2][3]

Putative secreted zinc protease, function unknown; induced by AI-2 pheromone[4]

Product Synonyms(s)

predicted peptidase[1], B1494[2][1], PqqE[2][1], PqqM[2][1], YddC[2][1], PqqL[2][1] , ECK1488, JW1489, pqqE, pqqM, yddC, b1494

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pqqL[2]

Regulation/Activity
Quick Links



        

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Notes

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First 26 aa are predicted to be a type I signal peptide. pqqL and yhiJ are paralogs.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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