tomB:Quickview: Difference between revisions
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0455, b0461, JW0450'', ybaJ<ref name='LIB:Riley_2006'/> | ''ECK0455, b0461, JW0450'', ybaJ<ref name='LIB:Riley_2006'/>, JW0450, ybaJ'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted protein<ref name='LIB:Riley_2006'/>, B0461<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''predicted protein<ref name='LIB:Riley_2006'/>, B0461<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0455, JW0450, ybaJ, b0461'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=tomB&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tomB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12429]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002285&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tomB&loc=MG1655%3A479932..479558,W3110%3A479932..479558,BW2952%3A382317..382691]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=382317&end=382691&gene=tomB&aa=mdeyspkrhdiaqlkflcetlyhdclanleesnhgwvndptsainlqlneliehiatfalnykikynednklieqideylddtfmlfssyginmqdlqkwrksgnrlfrcfvnatkenpaslsc]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tomB+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tomB]] | ||
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Latest revision as of 21:53, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
tomB |
|---|---|
| Gene Synonym(s) |
ECK0455, b0461, JW0450, ybaJ[1], JW0450, ybaJ |
| Product Desc. |
Identified initially as upregulated 37-fold in biofilms[4] and shown to influence biofilm formation[5]. Toxin overexpression modulator: antitoxin for toxin Hha[6]. |
| Product Synonyms(s) |
predicted protein[1], B0461[2][1], YbaJ[2][1] , ECK0455, JW0450, ybaJ, b0461 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Ren, D et al. (2004) Gene expression in Escherichia coli biofilms. Appl. Microbiol. Biotechnol. 64 515-24 PubMed
- ↑ Barrios, AF et al. (2006) Hha, YbaJ, and OmpA regulate Escherichia coli K12 biofilm formation and conjugation plasmids abolish motility. Biotechnol. Bioeng. 93 188-200 PubMed
- ↑ García-Contreras, R et al. (2008) Protein translation and cell death: the role of rare tRNAs in biofilm formation and in activating dormant phage killer genes. PLoS ONE 3 e2394 PubMed