bssS:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''yceP, ECK1045, b1060, JW5152''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''yceP, ECK1045, b1060, JW5152''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW5152''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted protein<ref name='LIB:Riley_2006'/>, B1060<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YceP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BssS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted protein<ref name='LIB:Riley_2006'/>, B1060<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YceP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BssS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1045, JW5152, yceP, b1060''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=bssS&s=search PortEco search(bssS)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=bssS&loc=MG1655:1120178..1119924,W3110:1122532..1122278,DH10B:1175623..1175369,REL606:1135270..1135524,BW2952:1023849..1024103 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1023849&end=1024103&gene=bssS&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=bssS+AND+escherichia+coli Pubmed(bssS)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=bssS Textpresso(bssS)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=bssS&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6557]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003153&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=bssS&loc=MG1655%3A1120178..1119924,W3110%3A1122532..1122278,DH10B%3A1175623..1175369,REL606%3A1135270..1135524,BW2952%3A1023849..1024103]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1023849&end=1024103&gene=bssS&aa=meknneviqthplvgwdistvdsydalmlrlhyqtpnkseqegtevgqtlwlttdvarqfisileagiakiesgdfqvneyrrh]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=bssS+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=bssS]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

bssS

Gene Synonym(s)

yceP, ECK1045, b1060, JW5152[1][2], JW5152

Product Desc.

regulator of biofilm formation[2][3]

Repressor of biofilm formation by indole transport regulation; global regulator, e.g. of AI-2 transport and motility genes; cold shock gene[4]

Product Synonyms(s)

predicted protein[1], B1060[2][1], YceP[2][1], BssS[2][1] , ECK1045, JW5152, yceP, b1060

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): bssS[2], yceP

Regulation/Activity
Quick Links



        

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Notes

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Increases Mtr expression and indole import; decreases AcrEF expression and indole export. yceP is induced three hours after cold shock in a pnp-dependent manner. Induced during biofilm formation.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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